Sporothrix schenckii: SPSK_06724
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Entry
SPSK_06724 CDS
T05555
Name
(RefSeq) small nuclear ribonucleoprotein D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
ssck
Sporothrix schenckii
Pathway
ssck03040
Spliceosome
ssck04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_06724
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
SPSK_06724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_06724
03041 Spliceosome [BR:
ssck03041
]
SPSK_06724
03032 DNA replication proteins [BR:
ssck03032
]
SPSK_06724
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
SPSK_06724
Spliceosome [BR:
ssck03041
]
Complex A
U1 snRNP components
Sm proteins
SPSK_06724
U2 snRNP components
SPSK_06724
Complex B
U1 snRNP components
SPSK_06724
U4/U6.U5 tri-snRNP components
SPSK_06724
Complex C
U2 snRNP components
SPSK_06724
DNA replication proteins [BR:
ssck03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
SPSK_06724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
27668699
NCBI-ProteinID:
XP_016592608
UniProt:
A0A0F2MJZ7
LinkDB
All DBs
Position
Unknown
AA seq
115 aa
AA seq
DB search
MTSTIGIPIKLLNEAQGHIVTLEITSGQTYRGRLLEAEDNMNVQLKDITVTARDGRVSHL
EQVYIRGSHVRFFIVPDMLRNAPMFRSRNARGRGVGLARGRATVSRARAGGRGGR
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgacttccacgattggcattccaatcaaactgctcaatgaggcccagggccacattgtc
acgctcgagatcacgtccggccagacctaccgcggccgcctgctggaagccgaggacaac
atgaacgtccagctcaaggacattacggtcacggcgcgcgacggccgtgtctcccacctc
gaacaagtctacatccgcggatcccacgtccgcttctttatcgtgcccgacatgctccgc
aacgcgcccatgttccgcagtcgtaatgcgcgcggtcggggtgttggtctggcgcgtggc
cgtgcaacggtcagccgtgcgcgggcaggcggccgaggaggccggtaa
DBGET
integrated database retrieval system
