Sporothrix schenckii: SPSK_06860
Help
Entry
SPSK_06860 CDS
T05555
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssck03009
]
SPSK_06860
Ribosome biogenesis [BR:
ssck03009
]
Eukaryotic type
90S particles
Other 90S particles
SPSK_06860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
Suf
NRDE-2
UTP6_C
DUF3464
Motif
Other DBs
NCBI-GeneID:
27668811
NCBI-ProteinID:
XP_016591054
UniProt:
A0A0F2MFA5
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
MMSSLKRKEASTGGVPSKAAKTNGGGDGDRPSKRAKANKSGDFKKTNDKTDKKKPDSESN
SVPATAGASTLVSRLKEDEPLFPRGGGSVLTPLEYKQIQVQAKSDALFDQANGDADKADG
PEKKKKQKGRRKLDAATAKPADDGPRIESLNYKAFSTINPLEVSVALPNNLVGHLPLTSI
SQTLNERIEAEAEAADKSDAEDEIDDSENDGVDLQELFTVGEYIRVSVVSTEDDTSNSKS
KRRIDLSVRPEHANAGLSEQDVVRNCTVMASVVSVEDRGYVMDLGIGGSDLRGFLAKKEL
DPSISEARVQPGAVLLCLVTSKSPNGKVAQLTTQKKQLGSLKSAATDAVTINTFLPGTVV
DILLSDVSGRGFVGKVLGHLDATADVIHSGAGTSDADLEDTYKIASRVRARVICNFPTSE
SPKVGVSVLPHIAALTPQTVESSPDKKKRKKQEQEQDDEQAAKLPLEALPLSSTVERCVV
RRVEPNVGLWVDVGISGVPGFVHISRVKDGKIDALFESSGPYKAGSSHPGRVVGYNPMDG
TFLVSFEKSVLEQAYLRIDDVPVGKVVPGTVKKMLISPSGVSGLIVEIADGVTGLVPELH
LADVKLQHPEKKFREGMKVKARVLSTDPEKHQIRLTLKKTLVNSDLPPISSFDDLTFGLQ
CLGTIVNIIPAGAFVQFYGDLRGFLPVSEMSEAPITNPEQHFRLGQVVSVRVHKFNRDRN
RLVVTCKDPTSFGVEKKLALKDLAPGEIVSATVMVKNADSAEVELANTGLKATLPVGHLS
DRSAAKNAAALQRLHVGEVLSELLVLDKHENRRAVTVSQKPSLIAASKAKTLLTSMEGVK
AGDMIAGFVRNITSTAVFVQFAANIVALLPKQLMPSGIQNQPDFGMHISQSLETRVISVE
NDRIVVSLQTEARTTTNADDDAIDTKLIKPADTALKTLGDVRVGVVTKAKITSIKATQLN
VQLADNVLGRVDITEVFDKWEDVPDSKDPLRNFKENQVIDVRVLGVHDARKRTYLPITQR
SSRSVFELSAKPSNVKAVSAPPAPTMDKIEPESSWIGFVNNRKSNCLWVSLSPNVRGRMY
GMEASNDLSLVKDLAENFPIGTALQVRVLHVDAEQGRLDLSARPADAKDEIDWSSIDKNM
VLPAKVTRVDDRQVVVQISKTVSGPIHLIDLADDYDQAVTTPHFRNDIVRVSVVSVDSNN
KKVRLSTRPSRVLNSSLKVEDREITSVADVVVGKIIRGFVRSVSDKGLFVNLGGDVVAMV
RIADLSDRYLKDWKAHFQVDQLVRGRVVAVNLEQKQVQLTLKASVVDDNYVPLSTLADFH
KDQIVSGRVRKVEEFGAFIVLDNTANVSGLCHRSEMADKAVRDARKLYKEGDVVKAKILS
INHENGRVNLGLKPAYFDNEDDDEDAMSVDDEDDGARLDDSDDDDSDDDMLDVREALQIT
GTDNDIDILNGSSDKDDEDSEDEDEDEEEGGVTQGATSGLSAGGFDWSGADLDKDMASSD
DDEGDADAAAAKKAKASAKRKKAAAAAQMDIDRTAELDISGPQTASDFERLLLGQPDSSA
LWVAYIAFQLQVSELAKARETAERAIKTINVREETERLNVWIAYLNLEVAYGTDETAEEV
FKRACQYNDQREVFERTASIYIQSGKHEKADEVFQAMTKKFGAQAPQIWINYAHFLHHSL
QDAERARALLPRAMQMLDKHAHVNLMARVAALEFRSPVGSQERGRTVFESLLAKSPKKFD
LWDQLLDLETSVYAAEKAKQAAKGGKSTKASKADASVVRDVFERGTKVPGIKPRRAKTWF
QRWAKWEEQHGDAKSREKVSARAKEWAAEAEKKKAEAEAEESE
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcacttaagcgcaaagaggcatctacgggcggtgtgccgtccaaagcagcc
aaaactaacggcggcggtgatggtgaccgaccctcgaagcgggccaaggccaacaagtcg
ggagacttcaagaagacgaacgacaagaccgacaagaagaagcccgactcggaatcgaac
tctgtcccagccacggcgggtgcttcgaccctcgtttcccgtctcaaggaggacgagcct
cttttccctcgtggcggcggcagcgtcctgacgcccctggaatacaagcaaattcaggtg
caggccaagagcgatgcccttttcgaccaggcgaatggagacgccgacaaggccgatggc
ccggaaaaaaagaagaagcagaagggcaggcggaagctcgacgccgccaccgcgaagccc
gccgacgacggccccagaattgagagcttgaactacaaggcattttcgaccatcaacccc
ctcgaagtctcggtcgccctgcctaacaacctcgtggggcaccttccccttacctccatt
tcccagaccttgaacgaacgcatcgaagccgaagctgaggcggccgataaaagcgacgcc
gaagatgagattgacgactcagaaaacgacggggtggacctgcaggagctgttcactgtc
ggcgaatacatccgggtgtctgttgtctccaccgaggacgacacatccaactccaagagc
aagcggcgcatagatttgtccgtgcggccagagcatgccaatgcgggactttctgagcag
gatgtcgtccgcaactgcactgtcatggcctctgttgtcagtgtggaagatcgtggttat
gtgatggacctgggcattggcggctcggatcttcgtggttttctcgctaagaaagagctc
gacccttcgatctccgaggcgcgcgtgcagcctggtgcggttcttctttgtctcgtcacc
agcaagtcacccaacggaaaggtggctcagcttaccactcagaagaagcagctgggcagc
ctcaagagcgccgccaccgacgctgtcacaatcaacacctttttgcccggtacggttgtc
gacattcttctgtcggacgttagcggccgtggttttgtcggcaaagtcctgggccacctc
gatgctactgccgatgtcatccattcgggtgctggtaccagtgacgccgaccttgaggac
acgtacaagatcgcgtcccgggtgcgcgcacgcgtcatctgcaactttcctacctctgag
tcgcccaaggttggtgtgtctgtcctccctcacatcgccgccctcacgccacagaccgtc
gaaagcagccccgacaagaagaagaggaagaagcaggagcaggagcaggacgacgagcag
gcggccaagcttccccttgaggccctcccattgtcctcgacggtcgagcgctgtgtcgtg
cgtcgggttgagcccaatgtcggcctgtgggtagatgttggcatcagcggcgttcctggt
ttcgtacacatctcccgcgtcaaggacggcaagatcgacgctcttttcgagtcttccggc
ccctacaaagccggctcttcccaccctggccgcgttgttggctacaaccccatggatggc
acatttctcgtttcctttgagaagtctgtcttggagcaggcatacctccgtattgacgac
gtacccgttggtaaagttgtccccggtacggtcaagaaaatgctcatcagcccgtccggt
gtgtctggtctgattgtcgagattgccgatggtgtcactggtctcgtccccgagttgcac
ctggctgatgtcaagctacaacatccagagaagaagttccgcgagggcatgaaggtcaag
gcacgcgtactgtccacagacccggaaaagcaccagatccgcctgacgttgaagaagacg
ctcgtcaactcggacctgcctcccatttcttcgtttgacgacctgacgttcggtctgcag
tgccttggtacaattgtcaacatcatccccgccggtgcttttgtgcagttctacggtgac
ctccgcggcttcctccccgtctccgagatgagtgaggcgcctatcaccaaccccgagcag
cacttccgcctgggccaggtcgtcagtgtccgtgtgcataagttcaaccgcgatcgtaac
cgtctcgttgtcacctgcaaggatcccacctcattcggcgtcgagaagaagctggcactg
aaggacctcgctcctggcgagattgtgtctgccacggtgatggttaagaatgctgacagc
gctgaggttgagctggccaacactggcctgaaggccaccctcccggtcggccacctttcc
gaccgttcggcagccaagaacgcggctgcgctccagcgcctccacgtcggcgaggtcctt
tccgagctccttgttcttgacaagcacgaaaatcgccgggcagtgaccgtctctcagaag
cccagcctcatcgcggcgagcaaagccaagacccttttgactagcatggaaggcgtaaag
gctggcgacatgattgctggctttgtccgcaacattacgtcgacggctgtctttgtccag
tttgccgcaaacattgtggctctgctgccgaagcagctaatgcccagtggcatccaaaac
cagcccgatttcggcatgcacatctcccagagcctggaaacgcgcgtcatttcggttgag
aacgaccgcattgtcgtatctctccagaccgaggctagaacgacaactaacgcagatgac
gatgccattgacacgaagctgatcaagccggccgacacggccctcaagacccttggcgac
gtgagagtgggtgttgtgaccaaggcaaagatcaccagcatcaaggcgacgcagctgaac
gttcagttggccgacaacgtgttgggccgtgtagacattaccgaagtctttgacaagtgg
gaggacgtgcccgactccaaggacccgctgcgcaactttaaggaaaaccaggtcattgac
gtgcgcgttctgggtgttcacgatgcgcgcaagcgcacataccttcccatcacgcaacgc
agcagccgcagcgtttttgagctgtctgcgaagccgagcaacgtcaaggctgtttcggca
ccgcccgccccgaccatggacaagatcgagcccgagtcgtcatggattggtttcgtcaac
aaccgcaagtccaactgcctgtgggtcagcctgtcgcccaacgtgcgcggccgtatgtac
ggcatggaggcgtccaacgacctgtcgctcgtcaaggatctggcggagaacttccccatc
ggcacggcactgcaggtgcgcgtgctgcacgtggatgccgagcagggccgcctggacctg
tcggcacggcccgctgacgccaaggacgaaattgactggtcgtcgattgacaagaacatg
gtgcttccggccaaggtgacgagagtcgacgaccggcaggtggtggtgcagattagcaag
acggtgtcgggcccgatccacttgatcgacctggccgacgactacgaccaggccgtgacg
acaccgcattttaggaacgacattgtgcgtgtctcggtcgtgtcggtggacagcaacaac
aagaaagtgcggctctcgacgcggccgtcgcgtgtgctgaactcgtcgctcaaggtcgag
gatcgcgagattacgagtgtggccgacgttgtggtcggcaagatcatccgcggttttgtg
cgcagcgtctcagacaagggcctttttgtcaacctgggtggtgatgtcgtggctatggtg
cgcattgcagacctttcagaccgctatctcaaggactggaaggcgcacttccaggtcgac
cagctggtgcgcggccgcgtagtcgcggtcaacctggagcagaagcaggtgcagctgacg
ctcaaggcgtcggttgtggacgacaactacgtgccgttgtcgacgcttgccgacttccat
aaggaccagattgtcagcggtcgcgtgcgcaaggtggaggaatttggtgccttcattgtc
ctggacaacacggccaatgttagtggtttgtgccaccgcagcgagatggctgacaaggcc
gtgcgggatgcgcggaagctgtacaaggagggcgatgtggtcaaggccaagattctgagc
atcaaccacgagaacggccgtgtcaacttgggcctaaagccggcctactttgacaatgag
gacgacgacgaagatgcgatgagcgtcgacgatgaggacgatggtgcgcgcctggatgac
tcggacgacgacgactcggatgacgacatgctggacgttcgggaagcccttcagattacc
ggcacggacaacgacatcgacatcctgaacggttcgtcggacaaggacgacgaagacagc
gaggatgaggacgaggatgaggaggagggcggtgttacgcagggcgcgacgagcggtctc
tcggccggtggctttgactggtcgggtgccgacctggacaaggacatggcttcctcggac
gacgacgagggtgatgcagatgctgccgccgccaagaaggccaaggccagcgcgaagcgc
aagaaggcggctgccgcggcgcaaatggatattgaccggacggccgagctggacattagc
ggtccgcagacggcaagcgactttgaacgtctgctgctcggtcaaccggactcgtcagcg
ctttgggtcgcgtacatagcgttccagctgcaggtcagcgagctggccaaggcccgcgag
acggccgagcgtgcgatcaagacgatcaacgtacgcgaagagacggagcgcctcaacgtg
tggattgcgtacctcaacttggaggtcgcgtacggcacggacgagacggccgaggaggtg
ttcaagcgggcgtgccagtacaacgaccagcgtgaggtgtttgagcgcacggcgagcatc
tacatccagtctggcaagcacgagaaagcggatgaggttttccaggccatgaccaagaag
ttcggtgcccaggcaccgcagatctggatcaactacgcacatttcttgcaccacagcctc
caggatgccgagcgggcacgtgctctgctaccgcgcgccatgcagatgctcgacaagcac
gcgcacgtcaacttgatggcgcgcgtggccgcgctcgagttccggtcgcccgtgggcagt
caagaacgcggccgtactgtgtttgagagcctgctggccaagtcgcccaagaagtttgac
ctgtgggaccagctgctggacctggagacgtccgtgtatgcggcggagaaggccaagcag
gctgcaaagggtggcaagagcaccaaggccagcaaggccgacgcgtcggtggtgagagat
gtgtttgagcgcggcaccaaggtccctggcatcaagccccggcgggctaagacgtggttc
cagcggtgggcgaagtgggaggagcagcacggcgacgccaagagccgcgagaaggtgtca
gcccgggccaaggaatgggcagccgaagctgagaagaagaaggccgaggctgaggccgag
gagagcgagtaa
DBGET
integrated database retrieval system
