Sporothrix schenckii: SPSK_06875
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Entry
SPSK_06875 CDS
T05555
Name
(RefSeq) WD repeat protein
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssck04131
]
SPSK_06875
Membrane trafficking [BR:
ssck04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
SPSK_06875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_1st
zinc_ribbon_16
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EML
MIOS_WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
27668825
NCBI-ProteinID:
XP_016591673
UniProt:
A0A0F2MH99
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MRKLLSKPAGLSQQHHDGTANSNSNSNSNLTSNAGHHDDEHMRSQHNQHGHLRDRPSTSP
VPLLYRPSGPQEAAFQAGVPIAALDKSPDGRAAVLAGRHVLKTVRIERGDSTDSHVSIRE
SFDLRTLITAQASPRANATASVAEQLSIRDVKWGTGRNDTHIFTACLRGKIFQYDLSQLG
GSSGNAGGSISFVQTQEDSRQINALDINPYKDAYLLSGSQDGMVRCFDTRAIVASRLGPT
FRPMQAFKCNADVRAVQWSPKQGFYFACCTEQGAVMKWDIRKPSAPVLRITAHEKACSSL
SWHPDGEHLLTGGVDKACHVWDFSNTADKRQKPKWTLHTPASVAAAAWRPGQWSATCQGL
RAAQVAVSYDVSGPKRPGINAAHVWDLARPTIPYKTVERFECSPSALLWKDQEFLWTAGE
DGLFCQNDMAFAPRVIDRTAVSTLAFSSTGDVLTFLDERPLPSRPRVLASVHKDLPSATA
AAAAAAALSSSHGSDPTSPAPALSISRSDSEDDVVRGFLMPRRRNLGRKRRASSVHHLGS
TPPSSGHPGSANSNNSHNSGREGSSGSNSNNNSKTSTGNNSLTVSLEYSLRATGAFRPQQ
IMAIGHIPSAARKDAYGYLAKIYLETLEERLPAYVRHGTVVPLPDRVASILDTYARAAEN
VSHFRLAQVWRIIAFAMDLLFRKRAQYHKERRLEGATYHTTRSSETHRQHQHQHHHHHNS
SDNTDKIKIRGERLPSGDPSGSTLESLSSSDDHGTSTLVPTASNSRTLPVRSLLAEEIES
TSNMPTPLARPVSGQAYRGGGDHYQPGTDHRSESASAADENSASSYDSASNGLPSDIESF
NLPPARYRDYLTNQPRRRHLDSMPVSETSHDSEVSHISSMEGYDFYDTEAMASAIDVPGA
TARPPPTSRPSITSLTERSPVRPPDFHRQDSTDSAGGRIFEISQASGPALDERDLMGAGG
SSLATTTTSTSEVRGRSGPSGHGQQNGNGRSGRSDNNALADESLSRSRGRHAEKPRHDKD
KDVLASSAASSSRLLRLNRALLSMEFGGSGSNPTLSTPGVTRDTYYRTNSQDTESSSNSL
LGPQVHPKQPTNSFTSKRPTLRRSASSRQDNMSVATSDLLPMAYAGKDGEDGEDGEGGED
KGDADVDTDRLTDRDYLPWPHDPPFPFPTKDGKASGFDRNAALNPYVIVERALAFEVRTS
PLHASAIVLLLGPLVPDDVIDPLQARSILRQHHARLMGMKLFLEAALLRNLCVQGWPSTT
GAPTNNIELSKWGVHADFASIVAPAKKNVSASYICVTCKKPREVDHNSPGSGSGTESLWR
CDRCKTVMAPCAVCGHRDVAAVDNLTRNNSSDDKSRTSSGGALSTWWYCVGCSHGGHLSC
LEEWHAQDAPAGSPRLGSFPPFPDAGTGTEFSDGCCPLDGCGHACLPGQWRTETIAQRSD
EVASRAAHLLPSAVAGSSTPQTDREPDDAPTPDSGRVRADGHEVGQSRAVDMVRESLRGP
GGGGSRSSDTASGRTILSSSPGRSSVLAGSGGSGANYPLPIEPRERERRKSVKFAGTDDR
TG
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagctcctcagcaagccggcgggcctgtcgcagcagcaccatgacggcacagcg
aactcgaattcaaactcgaactcgaacctaacctcgaatgcgggacaccacgatgacgag
cacatgcgatcacaacataaccagcacggccaccttcgtgaccgaccgtcgacatcaccc
gtgccgctgctctatcgccccagcgggccccaggaggccgcgttccaggcaggcgtgcca
attgcggcgctggacaaatcacccgacggccgtgccgccgtgctggccggccgccatgtc
ctgaagacggtgcgcatcgagcgtggcgacagcaccgacagccacgtctctattcgcgaa
tcgtttgatctgcgcacgctgatcacggcgcaggcgtccccgcgggccaacgcgacggcg
tcggtcgccgagcagctgtcgatccgcgatgtcaaatggggcacgggccgcaacgacacg
cacatcttcaccgcctgtctgcgcggaaagatcttccagtacgatctgtcgcagctgggt
ggcagcagcggaaacgccggcggcagcatttccttcgtccagacgcaagaggactcgcgg
cagatcaacgccctcgacatcaacccctacaaggacgcatacctgctgtccggcagccag
gacggcatggtgcgctgcttcgacacgcgggccattgtggcgtcgcgcctcggccccacg
tttcgccccatgcaggccttcaagtgcaacgccgacgtgcgcgccgtgcagtggtcgccc
aagcagggcttctacttcgcctgctgcaccgagcagggtgccgtcatgaagtgggacatt
cgcaagccatcggcgcctgtcctgcgcatcaccgcgcacgaaaaggcctgctcgtcgctg
tcgtggcacccggacggcgagcatctgctgaccggcggtgtcgacaaggcgtgccatgtc
tgggacttttccaacacggccgacaagcggcagaagcccaaatggacgctgcatacgccg
gcatctgttgctgctgctgcgtggcgtcccggccagtggtcggcgacgtgccaagggctg
cgggccgcccaggtcgccgtgtcctacgacgtcagcggccccaaacggccgggcatcaat
gccgcgcacgtctgggacctggcccgtccgaccataccctacaagactgtcgagcgcttc
gagtgctcgccgtcggccttgctgtggaaggaccaggagttcctatggaccgccggcgag
gatggcctgttttgccagaacgacatggcctttgcgccgcgcgtcatcgaccgcacggcc
gtctcgacgctcgcgttctcgtccactggcgacgtgctgacgtttctcgatgagcgaccg
ctgccgtcgcgaccgcgcgtgctcgcgtcggttcacaaggacttgccgtccgccacggct
gccgcggcggcggcggctgctctgtcgtcgtcgcacggctccgacccgacctcgcccgct
cctgctctcagcatcagccgcagcgactctgaggatgatgtcgtgcgtggtttcctcatg
ccacgccgccgcaacctgggccgcaagcggcgtgccagctccgtccaccatctgggctcg
actccgccgtcgtcgggtcaccctggctccgccaacagcaacaatagccacaacagtggt
cgagagggtagcagcggcagcaacagcaataataacagcaagacaagcaccggcaacaac
agcttgaccgtctcactcgaatactcgctgcgcgccactggtgcgttccggccgcagcag
attatggccattggccacatcccctcggccgcgcgcaaggacgcctacggttacctcgcc
aaaatctacttggagacgctggaagagcgactgcccgcctacgtgcgtcatggcacggtt
gtcccactgcccgaccgcgtggcgtccattctcgacacatatgcgcgcgcggccgagaac
gtcagccacttccgcctggcgcaggtctggcgcatcattgcgtttgccatggacctgctc
ttccggaaacgcgcgcagtaccacaaagagcggcggctcgagggagccacctaccacacg
actaggtcgtcagaaacacaccgtcaacaccaacatcaacatcaccaccaccacaacagc
agtgacaacacggacaaaatcaagattcgtggcgagcggctgccctcgggcgacccttct
ggcagcacactcgagtccctctcatcctccgacgaccatggcacgtcgacgctcgtgccg
acagccagcaacagccgcacactgcctgtccgctcgcttctcgccgaagagattgagagc
acctccaacatgccgacgcccttggcgcggccagtgtccggccaggcgtaccggggtggc
ggcgatcactatcagccaggcactgaccatcggtcggaatccgcatccgctgccgacgaa
aacagtgccagcagctacgacagtgcgagcaacgggctgccatccgacattgagagcttc
aatctaccacccgctcgctaccgagactacctgaccaaccagccacgccggcgacacctc
gactccatgcccgtctcggagaccagccacgacagcgaagtgtcacacatatcgagcatg
gagggctacgatttctacgatacagaggccatggccagcgccatcgacgtacccggcgcc
acagcccggccgccgcccacgagtcgcccgtccatcacgtcgctcacagagcgctcacct
gtgcggccgcccgactttcaccgacaagactcgaccgacagtgcaggtggccgcatcttt
gaaatttcgcaggcttcggggccggcactcgacgagagagacctcatgggtgccggcggc
agcagtctggccacgacgaccaccagcacctctgaggtccgtggccgcagtggtcctagt
ggccatggccaacagaacggcaatggacgcagcggacgtagcgataacaacgcgctggcc
gacgagtcgttgagccgttcgcgcggccgacacgccgagaagccgagacacgacaaagac
aaggacgtgctggcgtcgtcggctgcctcatcatcgcgactattgcgcctgaacagggcg
ctgctgtcgatggagtttggcggcagcgggtccaacccgacactctccacgcccggcgtc
acgcgcgacacatactaccgcacaaattcgcaagatacggagagcagcagcaactcgctc
ctgggcccacaggttcacccgaaacagccgacaaattcgtttaccagcaagcggccgacc
ctgcggcgcagcgcctcgtcgcggcaagacaatatgagcgtcgccacatccgaccttctc
cccatggcatatgcgggcaaggacggtgaggacggcgaggacggcgagggcggtgaggat
aaaggggatgccgacgtcgacaccgaccgcctcaccgaccgcgactacctcccctggccg
cacgaccctccgttcccttttcccaccaaggacggcaaggccagtggttttgaccgcaac
gctgcgctcaacccctacgtcattgtcgagcgcgcgctggcctttgaagtgcgcacgtct
ccgctgcacgcgtccgccatcgtcttgctgctcgggccgctcgtacccgacgacgtcatc
gatcccctgcaggcgcgttccattctgcgccagcaccacgcccggctcatgggcatgaag
ctctttttggaggccgccctgctgcgcaatctgtgcgttcaaggctggccgtcgacgacg
ggtgctccgacgaacaacattgagctgtccaaatggggcgtccacgccgactttgcgtcg
atcgtggcccccgccaaaaagaatgtctcggcctcgtacatttgcgtcacctgcaagaag
ccccgcgaagtcgaccacaacagccccggcagcggaagcggcaccgagtcgctgtggcgg
tgcgaccgctgcaagaccgtcatggcgccctgtgcggtgtgcggccaccgcgacgtggcg
gcagtggacaacctcacgcgcaacaacagcagcgacgacaagagcaggacgtcctccggc
ggcgcgctttctacgtggtggtactgtgtcggctgcagccacggcggtcacttgtcgtgt
ctcgaagagtggcacgcgcaggacgcaccggccggcagcccccgtctcgggtcgttccca
ccgttccccgacgctggcacgggcaccgagttttcagacggctgctgcccgctcgacggg
tgcggccatgcgtgtctccccggccagtggcggaccgagacaattgcgcagcggagcgac
gaggtggcgtcgcgggcggcacacctgctgccgtcggcggtggcgggcagcagtacgccc
caaaccgacagggagccggacgatgctcccacacccgactcgggccgggtccgcgcggac
ggccacgaagtcggccaaagtcgggcagtcgacatggtgcgggagtcgctgcgagggccg
ggcggtggaggcagtcgctccagcgacacagcttctggccgcacaatcctcagctcaagc
cccggccgcagctccgtcttggccggaagcggcggcagcggtgccaactatcctttgccc
attgagccacgcgaacgtgaacggcgcaagagcgtcaagtttgccgggacagacgaccgg
actgggtga
DBGET
integrated database retrieval system