Sporothrix schenckii: SPSK_06902
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Entry
SPSK_06902 CDS
T05555
Name
(RefSeq) hypothetical protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_06902
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
SPSK_06902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
DUF5086
Motif
Other DBs
NCBI-GeneID:
27668851
NCBI-ProteinID:
XP_016591344
UniProt:
A0A0F2MG42
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MASRGHDGREGRTGLSIANADGVDGKDLRSRHYEHRSHGSHHSHRSHREDDDRHRHEHRE
RERGDHGRDRDRHHDKKSRHDQPKGGPDDRDKDWYSSRHSRHNHREDLQHRERPGHGGGR
ASHDEKRSRHRSRERDVSKASDHCHRSDDRSQRDAQRGHHDTQMVVFQTAKQDRRGSHND
IYREAVGDSDNALFALDTRGDRLIWQFGTNDARRVPSYHRYRHGRSILGAQGRFTFVQDG
SKVIFGAESKSAEGSVLSDKNNPLLRRVLQSSTKSEPSREHGVSLRRRKPAVMANNSNEA
AKESEFVSLRTTKKRRRGPESESDDDEADSSQNTDSDEEDESESSSASSNDGLDTEEDSF
FTARDDAHSTTRRKLAELNQRVKDDPQDVDAWLDLVDLQDQQSLLLGNNHGDQSLGPSGG
PAKTKEEISGISSVKLSIIESALRQVHSPSARERLELAMMREGSKVWTPKRLAQQWTDLV
RNNASGSGLGFLLWKARLDFEMTNLSTLTVDGIKLFCVERLRALEAEATALTNDAAKEAE
IYSQVIYVFLRVTRFMYDAGFRDLAAAAWQATLESSFARPSTEVEGASLGQFWDSEIQRI
GEEGAQGWRSYAAKIQAGEDAEEALLDYNVETHSLPTLDFAKLAKSAYQEEASDMDEYKP
LYEAWVVAERQRANFAKLPARVIDDIDDGGFEDVFRVAVFSDLRALLFHIPDSLLPILKP
VLVDAFLLFCQLAPAFSTSTWIETARNDPFLAIVVLSGEGGVNGIKLEAPQEDPVDGLGT
AGRSPPDLFYDGSHIVRTSDVLFSNPRWFRYLPDWLHQQNPAAVEAPVPPSWVANTLRQL
VQLFGFNELALYSLAVDAMVNPTAVKKAARALIKQDISNTALYEAYAQAEASRGNVDVAR
TVLASATTGTGIANVEAELTLRQTWAWIELESGQKNGAVRRLALQSATREDTPHTPVTAR
EVNQPLSPAESLRLRHTLRTGMEFGISAGYARRAALFAQTFVLFEYLSSTDHEKELPQKH
QSKQGNILAAMAIATTFSEEMQSRGYAATVVHEQFLQCVARIIYFHATHGAYRPTDLQAP
LQKMVTLFPQNGIFLRLFAWIDPASASGLSQLRPDNPLQMILDTVVLTRDNDCPSSRAFV
IRHALQSGHGQGHAARAAFERALGGRHGSSDYNLTCYGNARLWQAFVHLTAVEAMASATV
AARRDGRGVRVRGVDKKMVALAKDVYYRSVRACPGAKDVLLEAFGPNTGLVATSSEAGML
PSDLRAVFQTVVGKGLRVHIDLVEAQDRVSQALNNLSK
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcgagggcacgatggccgggaaggccgaacagggctgtccatagccaatgca
gatggcgttgacggcaaggatctccggagccgtcactatgagcaccgcagtcatggcagc
catcatagtcaccgctcccaccgagaagacgacgatcgtcaccggcacgaacatcgtgag
cgagaaaggggagatcacggccgggaccgcgacagacatcatgacaagaagtctcgccac
gatcagccaaaaggggggccggacgacagagataaggattggtactcgagtcgccacagc
cgtcacaaccaccgtgaagacctgcagcatcgagagcgtccggggcacggaggtggacgt
gcatctcatgacgaaaagcggtctcggcatcgcagcagagagagagatgtctcgaaagcc
agcgaccactgccatcggagtgatgacagatcgcaacgcgatgcacagcgtggccaccat
gacacgcaaatggttgtctttcaaacggccaaacaggatcggcggggcagccacaatgac
atataccgcgaggctgtgggcgacagtgacaacgcgctgtttgcgctcgatacgcgcgga
gatcgtctcatttggcaatttgggacgaacgacgcacgccgcgtgccatcttaccatcgc
tacagacatggccgcagtatcttaggcgcgcagggacggtttacctttgtacaagacggc
tccaaggtgatattcggtgctgaatcgaaatctgctgaagggtctgtcctcagtgataag
aacaatcctctgctgcgccgcgttctacaaagctcgaccaaatcagaaccaagtcgcgaa
catggtgtgtcccttaggcgtcgaaaaccagccgtcatggccaacaacagcaatgaggcg
gcaaaggaaagcgagttcgtctctctgcgtactaccaagaagcggagacgtggaccagaa
tccgaaagtgatgacgacgaggccgactctagtcagaataccgacagcgatgaggaagac
gagtctgaatcctcctccgcctcgtcaaacgacggcttggatacagaagaagatagcttt
ttcaccgcgagggatgacgcacatagcacaaccagaagaaagctcgctgagctaaaccag
cgggtgaaagacgaccctcaagacgtcgacgcatggctagatcttgtcgaccttcaagat
cagcaaagccttctccttggaaacaaccatggcgatcaaagcttaggacccagcggtgga
cctgctaaaactaaagaagagatctctggaatttcgtcggtgaagctgtcaattatcgag
tcagcacttcggcaggtccactctccatctgcacgcgaacgactagagcttgcgatgatg
cgagaggggtccaaagtatggacaccgaagcgtctggcacagcaatggaccgatctggtc
cgaaacaatgcttctggtagcggcctgggctttctgctgtggaaagctcgccttgacttc
gagatgaccaacttgtctacgttgacggtcgatggtatcaagctcttttgcgtagagcgc
ttgcgggcactggaagccgaagcgactgctctcacgaacgacgctgcaaaagaggccgaa
atctactcccaagtcatttacgtcttcctgcgtgtaactcgattcatgtacgatgctggc
tttagagatcttgcagctgcggcatggcaagcaactctggagtcatcctttgcgcggccg
tctacggaagttgagggtgccagccttggccagttctgggacagcgaaatccaacgcatt
ggcgaagagggggcacaagggtggcgaagttatgcggccaaaatacaagctggcgaagac
gccgaggaggccctgttggactacaatgtagaaacccacagcctcccaactctggacttt
gcaaagcttgcaaaatctgcataccaggaggaggccagcgacatggacgagtacaaacct
ctctatgaagcatgggtggttgctgaacgacaacgggcaaattttgccaagctaccggcg
agagtcattgacgacattgacgacggtgggttcgaagacgtctttcgtgtcgccgttttc
tcggacctccgtgcgcttttatttcacatcccggactccctactgcccatattaaagccg
gtcctggtcgacgcattcctgctcttctgccaactcgcgccggcattttccacgagcact
tggattgagaccgcacgcaacgatcctttccttgctattgttgtcctctcaggagaaggt
ggtgtgaacggtataaaacttgaagccccacaggaggacccggtggatggtctcggcacc
gcgggtcggagcccgccggatctgttttacgacggcagccacatcgtcaggacctccgac
gtgctcttctcaaaccctcgctggttccgatatttgcccgactggctccaccagcagaac
ccagctgctgtagaggcaccggtgccaccttcatgggtggccaatacactacgccaactt
gttcagctgttcgggttcaacgaactggcgttatacagtcttgctgttgatgctatggtt
aacccgactgccgtcaaaaaggccgcccgagcactcatcaagcaagatatatcaaacact
gctttatacgaggcgtacgcacaagccgaggcttcacgcgggaacgttgatgttgcccgc
actgtattagcatctgccactaccggtacgggtatagcaaatgtcgaggctgaattgacc
ttgcgccaaacctgggcctggatcgaattggagagtggacaaaagaacggtgcggtccgt
cgtcttgccttgcagtctgccactcgtgaagacaccccacatacgccagtaacggccagg
gaagtaaaccagcccttatcaccggcagagtcactacggcttcgccacacgcttcgtaca
ggtatggagtttggaatttcagcaggatatgctcggcgggccgctctgttcgcgcagact
tttgtgctctttgagtacctgtcttccacggaccatgagaaggaactgccacagaaacac
cagtcgaaacaaggaaatatattggctgccatggctattgcgaccacattttcggaggaa
atgcagtcccgtggttatgcagcgaccgtcgttcacgaacagttcctccagtgcgtagcc
cgcattatatacttccatgccacgcatggggcataccgcccgaccgatttacaggcgcct
ctgcagaagatggtcactctgtttcctcaaaacggcatcttcctgcgtctatttgcttgg
atcgatccggcatcggcatcgggcttgtcgcagctgcggccagacaaccccctccagatg
attttggacacagtcgtacttacgcgggacaacgattgtccgagcagccgtgcctttgtt
atccgacatgccctgcagtcgggccacggccaaggccacgcagctcgcgcagcgtttgag
cgggcgctgggcggcagacacggcagcagcgattacaacctcacatgctatggcaacgca
cggctctggcaagcatttgtccacctgacggctgtggaggccatggcatcagcgactgtg
gcggcccgccgcgatggcaggggtgtccgggtgcgtggcgtggacaagaagatggtggcg
ctggccaaggacgtgtactatcgctccgtacgggcctgcccgggtgccaaggatgtgctt
ctggaagcctttgggccgaacacggggttggtggcaacgtcgtctgaagccggcatgttg
ccgagcgacctacgggcagtgtttcaaacggtggtaggcaaggggttacgtgtgcatatc
gatctagtcgaggcgcaggatcgagtgagccaagcgttaaacaacctttcgaaatga
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