Sporothrix schenckii: SPSK_06984
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Entry
SPSK_06984 CDS
T05555
Name
(RefSeq) coatomer beta subunit
KO
K17301
coatomer subunit beta
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssck04131
]
SPSK_06984
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssck04147
]
SPSK_06984
Membrane trafficking [BR:
ssck04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SPSK_06984
Exosome [BR:
ssck04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
SPSK_06984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
API5
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
27668931
NCBI-ProteinID:
XP_016591287
UniProt:
A0A0F2MK94
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MSAFLDGAYSLIHQDNAADVPTLNDLKNQLEKGNDESKLDTMRRILVIMLNGDPLPGILM
HIIRFVMPSKSKPLKKLLYFYYEICPKLDAAGKLKQEMILVCNGIRNDLQHPNEYIRGNT
LRFLCKLREAELIEPLLSSARSCLEHRHAYVRKNAVFAIASIFQHSPALIPDAAELLATF
IETETDPTCKRNGFASLASISHEAALTYLTSVFDSVPNAEELLQLAEIEFIRKDAVQNSH
NKARNRLDRAFTRGILIFDLLEANTSTVVYEAASSLTALTSNPVAVKAAAGKFIELSIKE
ADNNVKLIVLDRVDQLRKKNPGVLDDLVMEVLRVLPSPDIDVRRKALDIGLEMVSSKNVE
EVVLLLKKELSKTVDQDYEKNAEYRQLLIHSIHQCAIKFSEVAASVVDLLMDFVADFNNA
SAVDVINFVKEVVEKFPKLRATIVQKLFETLNEVRAGKVYRGILWIIGEYSVDENDIREA
WKRIRASLGEIPILASEQRLLDQGEPDEETKEVNGNGKPAAPTGSRRVLADGTYATETAF
TSQTSAAAARLEAVKAAQKPPLRQLILDGDYYLATVLSATLTKLVMRHSEISPDKARTNA
LRAEAMLIMISIVRVGQSQFVKAPIDEDSVDRIMTSVRSLAEFSEHKELETVFLDDTRKA
FRNMVVAEEKKRAAQLADEKAKTAIQVDDVVSIRQLSKKNTLDSTDLVEADLDRATGGDA
SGAEDLSSKLSRVVQLTGFSDPVYVEAYVKVHQFDIVLDVLLVNQTTETLQNLSVEFATL
GDLKVVERPTTQNLAPHDFHNVQCTIKVSSTDTGVIFGNVVYDGAHSTDTNVVILNDLHV
DIMDYIVPATCTETQFRSMWTEFEWENKVNINSKAPTLRAFLEGLMKATNMNCLTPEAAM
KGDCQFLSANLYARSVFGEDALANLSIEKEGEDGPITGFVRIRSRSQGLALSLGSLKGLS
KIGVAA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtttctcgatggggcgtacagcctgatccaccaggacaatgcggccgacgtc
cctaccctcaacgacctcaagaaccagctcgagaagggcaacgatgagtccaagttggac
accatgcgccgcatcctggtcatcatgctcaacggcgacccgctgccgggcatcctgatg
cacatcatccgcttcgtcatgccgtccaagtccaagccgttgaagaagctgctctacttc
tactacgagatctgccccaagctcgacgctgctggcaagctgaagcaggagatgatcctt
gtctgcaacggcatacgcaacgacctgcagcaccccaacgagtacattcgtggcaacaca
ctgcgttttctctgcaagctccgcgaggccgagctgattgagcccctcctgtcgtcggcg
cgctcgtgcctcgagcaccgccacgcgtacgtgcgcaagaacgctgtctttgccattgcc
tctatcttccagcactcgccggccctgatccccgacgcggccgagctcctggcgacgttt
atcgagaccgagaccgaccccacctgcaagcgcaatggctttgcctcgctggccagcatc
agccacgaggctgccttgacatacctcacaagcgtgttcgatagcgtgccgaacgcagag
gagctcttgcagcttgccgagattgagtttatccgcaaggatgctgtccagaacagtcac
aacaaggcacgtaaccgccttgaccgagcctttacgcgaggcatactcattttcgacctt
ctcgaagccaacacgtccaccgtcgtgtacgaagctgcgtcgtctctgacggccctgacc
agcaaccccgtcgccgtcaaggctgccgctggcaagttcatcgagctgagcatcaaggag
gccgacaacaacgtcaagcttatcgtcctcgaccgcgttgaccagctgcggaaaaagaac
ccgggcgtcctcgacgacctggtcatggaggttctccgggtgctgcccagcccagacatt
gatgttcggcggaaggccctcgacattggcctggagatggtctcgagcaagaacgtcgag
gaggttgtcctgctcctcaagaaggagctgtccaagacggtggaccaggactacgagaag
aacgccgagtaccgccagctcctcatccacagcattcaccaatgcgccatcaagttctcg
gaagtggccgccagcgtggttgacctgctcatggactttgttgccgacttcaacaacgcc
tctgccgtcgacgtcatcaactttgtcaaggaggtcgtcgagaagttccccaagctgcgc
gctaccattgtacagaagctcttcgagaccctgaacgaggtgcgcgcgggaaaggtgtac
cgtggcatcctctggatcatcggcgaatactcagtggacgagaacgacattcgcgaggcg
tggaagcgcatccgcgctagcctcggcgagatccccatcctggcgtccgaacagagactc
ctggaccagggcgagccggatgaggagaccaaggaggtcaacggcaacggcaagccggct
gccccgacgggctccagacgcgtgctcgctgacggtacctacgccaccgagactgcgttt
acgagccagacctcggccgctgcggctcgtctagaggccgtcaaggctgctcagaagccg
cctttgcgccagctgatcctcgacggcgactactacctcgccactgtcttgtccgcgaca
ctgaccaagctggtgatgcgccactcggagatttcgcccgacaaagcccgcaccaacgcg
ctgcgcgctgaggctatgctgattatgatttcgattgtgcgtgtcggtcagtcccaattc
gtcaaggcgccaatcgacgaggactcggtggaccgcatcatgacgtcggtgcgtagtctg
gccgagttcagcgagcacaaggagctcgagaccgtgttcctggacgacacgcggaaggcg
ttccgcaacatggtggtcgccgaggagaagaagcgcgccgcccagcttgccgacgagaag
gccaagacggccatccaggtcgacgatgtggtgtcgatccgccagctcagcaagaagaac
acgctggacagcacggacctggtggaggccgacctggaccgggcgacgggcggcgacgcg
agcggcgccgaggacctgtcgagcaagttgtcgcgcgttgtgcagctgacgggtttctcg
gaccctgtgtacgtcgaggcgtacgtcaaggtgcaccagttcgacattgtgctggacgtg
ctgctggtgaaccagacgacggagacgctgcagaacctgtcggtggagtttgccacgctg
ggcgacctcaaggtcgtggagcggccgacgacgcagaacctggcgccgcacgacttccac
aatgtgcagtgcacgatcaaggtgtcgagcacggacacgggcgtcatctttggcaacgtg
gtgtacgacggcgcccactcgacggacaccaacgtggtgattctgaacgacctgcacgtg
gacatcatggactacattgtgccggcaacgtgcacggagacgcagttccggtcgatgtgg
accgagttcgagtgggagaacaaggtgaacatcaacagcaaggcgccgacgctgcgcgcc
ttcctcgagggcctgatgaaggcgacgaacatgaactgcttgacgcccgaggcggccatg
aagggcgactgccagttcctcagcgccaacctctacgcacgcagcgtgtttggcgaggac
gctctggccaacttgagcattgagaaggagggcgaggacggcccgatcacgggctttgtg
cggatacgcagcagatcgcaaggcctggccctcagcctgggctcgctgaagggcctcagc
aagattggcgtcgcggcttaa
DBGET
integrated database retrieval system
