Sporothrix schenckii: SPSK_07037
Help
Entry
SPSK_07037 CDS
T05555
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ssck
Sporothrix schenckii
Pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_07037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_07037
03041 Spliceosome [BR:
ssck03041
]
SPSK_07037
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SPSK_07037
Spliceosome [BR:
ssck03041
]
Complex B
Other components
Prp19-related factors
SPSK_07037
Complex C
SPSK_07037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
Suf
TPR_8
TPR_10
AbiH
NRDE-2
Motif
Other DBs
NCBI-GeneID:
27668984
NCBI-ProteinID:
XP_016590569
UniProt:
A0A0F2MDX5
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MAASATPAVATAPGPRPDIHLLADADAPYEQDIYRNQGTTRPWLSYIRHKVQHGTVQEQA
YVMERACTQLPRSYKLWKMYLVFRTKHVSKLNAASYAAEYRKVNALFERAIILLNKMPRI
WELYLKFLMQQPLVTFTRRTFDRALRALPIAQHNRIWALYRPFANSAGGETAVRIWRRYM
QVHPEDAEDFIELLTQSGLYTEAVRTYIKVLNNARFRSKKAKGHYELWSEMIDLLVEHAN
EIQTGQETGIDVERIIRSGIDRYSDQRGKLWSGLAAYWTRRGSFERARDIFEEAITTVMT
VRDFTLVFDSYVEFEESIIGALMDLASTRAEKGVADEAADFDLDIRMLRFEHLMDRRPFL
LNDVLLRQNPNNVAEWEKRVGLWGENKQEVVNTYTKAIATIEPKKAVGVFHQLWANYAKF
YDQGGDIRNARVIMEKAVKVPFRSVAELADMWIEWAEMELRNENFDDAVRVMAKAVQAPK
RSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLEETKKVYERIFELRIATPQTVVN
YANLLEEHEYFEDCFKIFERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAIE
GCPPRFAKVIYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGM
ASTRPIYERAISTLPDAEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPDFWA
KWHGFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFVASQALAKSQQQRQAAAVAAANGEH
ADGGENGDAEGERADAMAALERQARAPVGFVAASDAPIVSAAAAAPQPVANPDAINIDMD
DEDDE
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatctgctactccagctgtggccaccgctcccggcccaaggccagacattcat
cttctggccgacgccgatgcaccctacgaacaagacatataccgcaaccaaggcacaaca
cggccatggctttcttacattcgacacaaagtccagcatggcaccgttcaggagcaggct
tacgtgatggaacgggcctgcacacaactgccgcgctcctacaagctgtggaagatgtac
ctcgtcttccgcacaaaacacgtatccaagctcaatgccgcctcctacgctgccgagtac
cgcaaggtcaacgcgctctttgagcgtgccatcatcctcctcaacaagatgccacggata
tgggaactctacctcaagtttcttatgcagcagccgctcgtcacattcactcgccgcaca
tttgaccgcgccctgcgcgccctgccaattgcccaacataaccgaatatgggcgctgtac
cggccctttgccaactccgccggcggcgagacagcggtccgcatctggcggcgctacatg
caagtccacccggaagacgccgaggactttattgagctccttacacagtccggactctac
accgaggccgtgcggacgtacatcaaggtgctcaacaacgcacggttccgcagcaaaaag
gccaagggccactacgagctgtggagcgagatgatcgacctgctcgtggagcatgccaac
gagatccagactggccaggagacgggtattgacgtcgagcgcatcatccgcagtggcatt
gaccggtattcggaccagcggggcaagctgtggtcgggcctggccgcgtactggacacgg
cggggcagctttgagcgggcgcgcgacatcttcgaggaggccatcacgacggtcatgacg
gtgcgcgactttacgctcgtgttcgattcgtacgtggagtttgaagagtccattattggc
gctctcatggacctcgcttcgacgcgtgctgaaaagggcgtggctgacgaggcggcggat
tttgacctcgacatccgcatgctgcgcttcgagcatctgatggaccggcggccattcttg
ctgaacgacgtgctgctgcggcagaacccgaacaacgtggccgagtgggagaagcgtgtc
gggctgtggggtgagaacaagcaggaggtggtcaacacgtacacgaaagcgattgcgacc
atcgagcccaagaaggctgtgggggtgttccaccagctgtgggccaactacgccaagttc
tacgaccaaggcggcgacatccggaatgcgcgcgtcattatggaaaaggccgtcaaggtg
ccgttccggtcggtggccgagctggcagacatgtggatcgagtgggcggagatggagctg
cgcaacgagaactttgacgacgcggtccgcgtcatggccaaggcggtgcaggcgccgaag
cgctcgacagtggactattttgacgagacgctgtcgccacagcagcgggtgcacaagagc
tggaagttgtggagcttttacgtcgaccttgtcgagagcgtcagctcactcgaggagacc
aagaaggtgtacgagcgcatctttgagctgcggatcgcaacgccgcagacggtggtcaac
tatgcgaacctgctggaggagcatgaatactttgaggattgcttcaagatttttgaacgc
ggcctcgacctgttcagctatccggtggcctttgagctgtggaatctatacttgacaaag
gcagtggaccgcaagattggcatcgagcggctgcgcgatctgtttgagcaagccattgag
ggatgcccaccgcggttcgccaaggtcatctatctcatgtacggcaatctcgaggaagag
cgcggcctggcacggcacgcgatgcgcatctacgagcgggcgacgcgggcggtgtcggac
gaggaccgggccgacatgttcaacttttacattaccaagtcggcgtccaacttcggcatg
gcgtcgacgcggcccatctacgagcgcgccatctcgacgctgccagacgccgaggcgcgc
gacatgtgcctcaagtttgccgacatggaaaagcggctcggcgagattgaccgggcgcgg
gcgatttacggacacgcgtcgcagttttgcgacccgcggacgaaccccgacttttgggcc
aaatggcacgggttcgaggtgcagcacggcaacgaggacacgttcaaggagatgctgcgg
atcaaacgcagcgtgcaggcgcagtacaacaccgacgtcaactttgtggcgtcgcaggcg
ctggccaagagccagcagcagcgccaggcggccgcggtcgccgctgccaacggcgagcac
gccgacggcggcgaaaatggcgacgcggagggcgagagggccgatgccatggcagcactc
gagcgacaggcgcgtgcgcccgtgggctttgtggcggccagcgacgcacccattgtgtcg
gcggctgcggcagctccacaaccggtggccaatccggatgccattaacatcgacatggac
gatgaagatgacgaatag
DBGET
integrated database retrieval system
