Sporothrix schenckii: SPSK_07213
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Entry
SPSK_07213 CDS
T05555
Name
(RefSeq) protein VTS1
KO
K27407
RNA-binding protein VTS1
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_07213
04131 Membrane trafficking [BR:
ssck04131
]
SPSK_07213
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
SPSK_07213
Membrane trafficking [BR:
ssck04131
]
SNARE
SNARE associated proteins
Others
SPSK_07213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
27669154
NCBI-ProteinID:
XP_016590471
UniProt:
A0A0F2MG08
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MNNMSSLAGNRMSTPEASQPSSLRPPSSRAMVGNAHLRASADMAALSGTNPSSRIRPSSD
FYGQPQPPPPPAIGELDPQDKLAQEWIADIDQYETTLEEMAAATLDQDFKDELSAIEQWF
RVLSEAERTAALYALLQQTTQVQIRFFIQVLRQMGKNHPMSGVLSPANFDKDPMSNRLSD
AMNKLSVDSARNSMARNSIMSVKRQSGLDPSTINAMFPDAAAAIATEKAKYTQQTGNPPV
SNRNSAIDPRNSLVAPTISTPADAAAAATALPGPSNGQNPTSPWGPSSSANPAQPTVTSP
GQPPMGQFSQPPPSAGGLRSPRPAMTLSPQAINADKNADLPLLSPYGASGNWASMVNTPM
VANFNQQQQSGNQADMVANATAMKLAALSTVNNRVFLDDVRKYRRTRSNDAPGAPQNPLS
PSAPTIQLPGGTTNVVMVNEHGQILRTEPMLAVHGQAPLGFGAQRSRPNSPGIAMQGGFG
GVPFTSPQNNGFLSAYDGSGLMNNSLNLGGMNLGQLGLGGPPEGYLSDHSDIIRGRSPRG
RRGSSKPPEDPTDPTLLQDIPSWLRSLRLHKYTDNLKDMQWMDLVELDDKQLEERGVNAL
GARRKMLKVFEQVKGSQCSDPPARIT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatgtcgagcctcgccggcaatcggatgagcacgcccgaggccagccaaccc
tcgtccctccggcctccctcgtcccgtgccatggttggcaatgcccacctccgagcatcc
gccgatatggctgccctgtcgggcaccaatccgtctagccgcatacgtccgtcgtccgac
ttttacggacagccgcagccgcctccgcccccggccataggcgagctcgacccccaggac
aagcttgcccaggagtggatcgccgatatcgatcagtacgagacaacgctggaggagatg
gcagcagctacgctggaccaggatttcaaggacgagctgagcgctatcgaacagtggttc
cgcgtgttgagtgaggccgagcggaccgccgcgctgtacgccctgctgcaacaaaccaca
caagttcaaattcgtttcttcattcaggtgctgaggcaaatgggtaagaaccaccccatg
tctggtgttttgtcgcccgccaactttgacaaagaccccatgtcgaaccggttaagcgac
gcgatgaacaagctcagtgtggactctgcgagaaattccatggcgcgcaactcgatcatg
tcggtcaagcgccagtccggcctggacccttcgaccatcaatgccatgttccccgatgcc
gccgccgccattgcgaccgagaaggccaagtacacgcagcagacaggaaacccgcccgtc
tccaaccggaacagtgccattgatccgcgcaactcgctcgttgcgccgacaatctctacc
cctgccgatgctgcagcggccgccactgctctgccggggccgtccaacggccagaacccg
acctcaccatggggaccttcctcttcagcgaaccctgcacagccgactgtgacatcacca
ggacagccaccaatgggccagttctctcagccgcccccgtccgccggtggcctccgctct
cctcgaccggcaatgacgctgtcaccacaggccatcaacgccgataaaaacgccgacctt
cctctgctatcgccctacggtgccagtggcaactgggcatcaatggtgaatacgcccatg
gtggccaacttcaaccagcagcagcagagcgggaaccaggccgacatggtcgcgaatgcc
acggccatgaagcttgctgccctgtcaacggttaacaaccgtgttttcctcgacgatgtg
cgcaagtaccgccgtactcggtcgaacgatgctccaggagctccgcagaatccgctgtca
cccagtgcgccgacgatccagctgcctggcggtacgacgaatgttgtgatggtcaacgaa
cacggtcagattctgcgcaccgagccgatgctggctgtgcatggtcaggcgccgctcggc
tttggtgcgcaacgctcacggcccaactcgcccggcatagcgatgcagggcggctttggc
ggcgtccccttcacgtccccccagaacaatggcttcttgagcgcctacgatggctcgggg
ctgatgaacaactctctgaaccttggtggtatgaaccttggccaactcggcctgggcggc
ccgcccgagggatatctctcagaccactcagacattatccggggccgttctccgcgcgga
cgtcgcggtagctcgaaacctccagaggaccctaccgatcctacgctgctgcaggacatc
cccagctggctgcgtagtctgcgtctgcacaagtacacagacaaccttaaggacatgcaa
tggatggacctcgtcgagctggacgacaagcagcttgaggagcgtggagtgaatgcgctt
ggcgctcggcggaagatgctcaaggtatttgagcaagtcaaaggttcgcagtgctcggat
cccccggcccgtatcacatag
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