Sporothrix schenckii: SPSK_07272
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Entry
SPSK_07272 CDS
T05555
Name
(RefSeq) ATP-dependent RNA helicase DDX5/DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_07272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssck03041
]
SPSK_07272
03009 Ribosome biogenesis [BR:
ssck03009
]
SPSK_07272
Enzymes [BR:
ssck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPSK_07272
Spliceosome [BR:
ssck03041
]
Complex A
U1 snRNP components
U1 related factors
SPSK_07272
Complex B
SPSK_07272
Ribosome biogenesis [BR:
ssck03009
]
Eukaryotic type
Pre-60S particles
Helicases
SPSK_07272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Glyoxalase_3
Motif
Other DBs
NCBI-GeneID:
27669213
NCBI-ProteinID:
XP_016591076
UniProt:
A0A0F2MHR3
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MSYGGGYGGSRGGGGGYSNGGHRDGGYSNGYGSHGGGYGGGYGGGGGGYGGGYGGGGGDR
MSALGANLHKQEWDLDALPKFEKSFYKEHPSVTERSSGEVEKFRREHSIAVTGKDVPKPV
ETFDEAGFPRYVIDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSI
VHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGRSSRIRNTCVYGGVPKGPQIRD
LSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR
QTLMWSATWPKEVRNLASDFLTNFIQVNIGSLDLSANHRITQIVEVVTESEKRDRMIKHL
EKALDDKEKANKVLIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGK
SPVMVATDVASRGIGMYTTSTRHPVPYASHHTVSLPTLAHDAPYHLPFIVIDRSFDTVVH
FQPKTLRLRPFTVPSTHHRLPPKSTTPTATRALSCFTLMFRGFLDCANLTQLACSRASCS
WLCQSFYR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggcggcggttacggtggctcgcgcggcggcggcggtggctactccaatggc
ggccatcgtgatggcggctactccaacgggtacggctctcatggtggtggttacggcggc
ggctacggcggtggtggcggtggctacggcggcggctacggtggcggcggtggtgaccgc
atgtctgccctcggcgccaacctgcacaagcaagagtgggatctggatgccctccccaag
ttcgagaagtctttctacaaggagcaccccagcgtcaccgagcgctcgtctggcgaggtc
gagaagttccgtcgcgagcactccattgctgtcactggcaaggacgtccctaagcctgtc
gagacctttgacgaggctggattcccccgctatgttattgacgaagtcaaggcccagggc
ttccctgcccccactgccattcagtcccagggctggcccatggctttgtctggacgtgat
gttgtcggtattgccgagacaggttccggaaagaccctgacctactgtctgccctccatt
gttcacatcaacgcccagcccctgctggccccgggtgacggccctatcgtcctcgtcctc
gcccctacgcgtgagcttgctgtccagatccagcaggagattaccaagttcggcagatcc
tcgcgcatccgcaacacttgcgtgtacggcggtgtgcccaagggtccccagattcgcgac
ctgtcgcgcggtgtcgaggtgtgtatcgccaccccgggccgtctgattgacatgctcgag
tctggcaagaccaacctgcgtcgtgtcacctacctggttctcgacgaagccgaccgcatg
ctggacatgggtttcgagccgcagatccgcaagatcattagccaaatccgccccgatcgc
cagaccctcatgtggtccgccacctggcccaaggaggtccgcaacctcgcctccgatttc
ctgaccaacttcatccaagtgaacattggctccctcgacctgtcggccaaccaccgcatc
acccagattgtcgaggttgttaccgaaagtgagaagcgtgaccgcatgatcaagcacctc
gagaaagctctcgatgacaaggagaaggccaacaaggtcctgatcttcaccggaaccaag
cgtgtcgccgacgacatcacccgcttcctgcgccaggacggctggcccgcactgtccatc
cacggtgacaagcagcagaacgagcgcgattgggttcttgaccagttcaagactggcaag
tcgcccgtcatggttgccactgatgtggcttcccgtggtattggtatgtatactacaagc
acccgccaccccgtcccctacgcttcccatcatactgtctcactcccaactcttgcccat
gatgccccttaccacctcccctttatcgtgattgatcgatcgttcgacacggtcgtccat
ttccaaccaaaaaccttacgcctgcgtcccttcaccgtcccctccacccaccatcgtctt
cccccgaaatctacaacgccaacagcaacgcgagctttgtcgtgctttactcttatgttt
aggggctttcttgattgcgcaaacttgacacagctggcctgctctcgagcttcgtgctct
tggctttgccagtctttttacaggtga
DBGET
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