Sporothrix schenckii: SPSK_07491
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Entry
SPSK_07491 CDS
T05555
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
ssck
Sporothrix schenckii
Pathway
ssck03013
Nucleocytoplasmic transport
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_07491
09122 Translation
03013 Nucleocytoplasmic transport
SPSK_07491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_07491
03041 Spliceosome [BR:
ssck03041
]
SPSK_07491
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
SPSK_07491
Spliceosome [BR:
ssck03041
]
Complex C
Other components
EJC/TREX
SPSK_07491
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SPSK_07491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Cytochrom_D1
Nup160
Motif
Other DBs
NCBI-GeneID:
27669430
NCBI-ProteinID:
XP_016591112
UniProt:
A0A0F2MJU1
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MPSFVIKPRERLSKDKFPNYFSGFKVQAYQDPAASRGMQFHNPAADKDKDKDQDTDEATI
NGVRTIAWNPLSSLVATGSSDRTVRVWNPDKPVVRQSTELKGHTAAIEKVAFNPIKDAEL
CSLSADGAVKFWDVRTKTCTNEVRVPGEASTLVWAPDGDYLIVGGKEKGSSDSHKIFILE
RTLTAPTAVNTMPARTNDMAFCWSGKRVFVATGDGRTRILSFPELEPVLKVNHTVGEGES
DEFSLKGHSAECLSVALSPTGRTLATGGTDAIIALWDTTKWTCQRTITTMAGPVRSLSFS
WDGNYVIGGSTEGAELEVTQTESGEHVYTFKTAQPVPVVAWAPTRFFLAYAELGSLRIVG
VDTERKY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtttgtgatcaagcctcgcgagaggctgtcaaaagacaagtttccgaactac
ttctcgggcttcaaggtccaggcataccaggatccggcagcttcaagaggcatgcagttc
cacaacccagcagcagacaaggacaaggacaaggaccaggatacggatgaggcaactatt
aatggcgtgcgcacaatagcttggaacccgctgagctcacttgttgcaactggttcgagc
gacaggacggttcgcgtctggaacccggacaagcctgtcgttcggcaatctacagaactc
aagggccacacagcggccatcgagaaagtcgcattcaaccccattaaggacgctgagctg
tgtagcttgagcgcggatggtgccgtcaagttttgggatgtgcggacaaaaacatgcaca
aatgaggtccgggtacctggcgaagccagtactcttgtttgggcacccgatggtgactac
ctgatcgtgggagggaaagagaaaggcagcagtgacagccacaagattttcatcctcgaa
cggacactaactgcaccgacggcggtcaacacgatgccagcacggacaaacgacatggct
ttttgctggagcgggaaacgcgtgtttgtcgcgacgggcgacggtcgcacacgcatcctc
tcctttccagagctggagcccgtcctcaaggtcaaccacacggtcggcgaaggcgagtcg
gacgagttttcgctcaagggccattcggcggagtgtctgtcggtggctctcagccctaca
ggacggacattggcgacaggtgggacggacgcgataatagcactctgggacacaacgaag
tggacgtgccagcgaacaatcacaactatggctggaccagtaaggagtttaagtttcagc
tgggacggaaactacgtgattggcgggagcacagaaggtgcggaactggaggtcacgcaa
acagaaagtggcgagcacgtctacacgttcaaaactgcacaaccggtgcctgttgtggca
tgggcgccgacgcggtttttcttggcatacgcggagctgggcagcttgcgcatcgtcggc
gtcgacacggagagaaagtactag
DBGET
integrated database retrieval system