Sporothrix schenckii: SPSK_07557
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Entry
SPSK_07557 CDS
T05555
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssck03016
]
SPSK_07557
Enzymes [BR:
ssck01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SPSK_07557
Transfer RNA biogenesis [BR:
ssck03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
SPSK_07557
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
LHC
Motif
Other DBs
NCBI-GeneID:
27669493
NCBI-ProteinID:
XP_016591425
UniProt:
A0A0F2MI64
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MASSVARSPVGHDRNDRRDKGEAETEHNGGQNKIRIAKIGGRYLVFDVADVARLRRQHDL
CAVLVGITPQAPNQTVFSSLPLELTADEVRWLVYERHAAYVADDWQAHLAALQQPTARRA
YMDNVLRQRQAAQVVADEIMAERERRGAEVRASQVAKGASRKSKKAAHKAGDSSKKDAVK
ETDAIPEPELENEAEAAQPVVAAANDIDTASATETVVDDVPHKNLVTKATDRANDHADLE
PLLRAPPRTEEVMQQEDDFLFGGPVEVERMKADRARRGTSPTPEKMNKEKDDKKTDNSAA
SSKPLVRITPTTSAALLADREEDEDDGTAALIPPRSTLLASTSSFASAALRAHLADRGYF
TTPGLRFGGALSVYPGDPFRYHAHFVANSYGWDEPIKLLDVVGTGRLATGVKKGLLIGSA
KPTEGNSAGDGVGAVVRTFTLEWAAI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcggtggcccgttcgccggtcggccacgacagaaacgacagaagggacaaa
ggggaagcagagacagagcacaatggtggacagaacaagatccgcatcgcaaagattggc
gggcggtatctcgtctttgatgtcgccgacgtcgcgcgcctgcgtcgccagcatgacttg
tgtgccgtcctcgttggcatcactccgcaagcgcccaaccagaccgtctttagtagtctg
ccactcgagttgacggccgacgaggtacggtggctcgtatacgagcgccatgccgcctac
gtcgcagacgactggcaggcgcacctggcagctcttcagcagccaaccgctcgccgtgcc
tacatggacaatgtgctacgtcagcggcaggcagcgcaggtggtggctgacgagatcatg
gccgagcgcgaacggcggggtgctgaagtgcgcgcgagccaggttgcaaaaggggccagc
cgaaagagcaaaaaagccgcccacaaggccggcgacagcagcaagaaggacgccgtaaaa
gagacggatgcaattccagagccagaactggaaaatgaagcggaagctgcacagcctgta
gtagcagcagcgaacgacatagacactgcatccgcgaccgagactgttgtcgatgacgtc
cctcacaagaatctggtgaccaaggcgacggatcgcgcaaacgaccatgccgatttggag
cctctgttacgggcaccaccgcgtacagaggaggttatgcaacaagaagacgattttctc
ttcggaggcccggtggaagtagagagaatgaaagccgaccgagcccgtcgaggcacatcg
ccgacgcccgagaagatgaataaagagaaggatgacaagaaaacagacaattctgctgca
agtagcaagcctctcgtgcggatcacaccgactacttcggctgccctccttgcggatagg
gaagaggacgaagacgacggtactgccgccttgatcccgccacggagcacattgctcgcc
tcaacgtcttccttcgcgtcggccgctttgcgtgcccaccttgcggatcggggctacttc
acgacacctggtctgcgctttggtggcgcactcagtgtctatcctggtgacccgttccgg
taccatgcccactttgtggcgaacagctacggatgggacgagcccatcaagctcctggat
gttgtcggcactggccgcttggcgacaggtgtcaagaagggattgctgattggcagtgcg
aagcctaccgagggaaattctgcaggcgacggcgttggcgccgttgtgcggacgtttacg
ctcgagtgggcggccatctga
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integrated database retrieval system
