Sporothrix schenckii: SPSK_07783
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Entry
SPSK_07783 CDS
T05555
Name
(RefSeq) exosome complex component MTR3, fungi type
KO
K12587
exosome complex component MTR3
Organism
ssck
Sporothrix schenckii
Pathway
ssck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSK_07783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_07783
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SPSK_07783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
27669716
NCBI-ProteinID:
XP_016590574
UniProt:
A0A0F2MDY0
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MADRRRVNGPVGATFAPVFAKEEQAKVAKVPERSRPNDIIRKIYLQTGVTPSASGSAYLE
LSSGAVPSTSGLKLSCTVHGPRALPRSAPFSPHLILSTHVKYAPFATKERRGYLRDTSER
DLAVHLETSLRGAILGDRWPKSGVDIVVSVIEADQDRSAPSVDPDEELWGLMSVLSGCIT
VASAALADAGIDCVDTVAGGVAAVVETTEGVEAETRDTKETVLVVDPVPAEHGRIVAACC
VAYLPNRDEVTNLWLKGDLPGSAGDELHLKMLDKALHAARQADQVIVAALKDSAEDSG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccggagacgagtaaacggaccggtcggggccacgtttgcgccggtgtttgca
aaggaggagcaggccaaggtggccaaggtgcccgagagatcaaggcccaacgacataata
cgaaagatttacctccaaacgggcgtcacgccgtctgcgtctggctcggcctacctggag
ctgagttccggcgcggtccccagtacctcgggccttaaactcagctgcacagtccacggc
ccgcgcgccctgccgcggtcggcgcccttctcgccgcatctgatcctatcgacgcacgtc
aagtatgcgccgtttgccaccaaggagcgtcgcgggtacctccgcgacacatcggagcgc
gacctggccgtgcatctggagacatcgctgcgtggcgcgattctgggcgaccgatggccc
aagagtggtgtggacattgtggtgtcggtgattgaggcggaccaggaccggtcggcgccg
tccgtggatccggatgaggagctgtggggtctgatgagcgtgctgagcgggtgcatcacg
gtggcgtcggcggcgctggcagatgctggcatagactgcgtcgacactgtcgccggcggc
gtggcggcggtggtggaaacgacagagggtgttgaggcagaaacaagagacacaaaagag
acggttcttgtagttgatccagtgccggcagagcacggcaggatcgtggccgcgtgttgc
gtggcctatctaccgaaccgcgacgaagtgacaaacttgtggctcaagggcgacttgcca
ggctcggccggggatgagctgcacctgaagatgctggacaaggcgctccacgctgcacga
caggccgaccaggttattgttgccgctctcaaggattcggccgaagacagtggctga
DBGET
integrated database retrieval system
