Sporothrix schenckii: SPSK_08361
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Entry
SPSK_08361 CDS
T05555
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
ssck
Sporothrix schenckii
Pathway
ssck03420
Nucleotide excision repair
ssck04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SPSK_08361
09124 Replication and repair
03420 Nucleotide excision repair
SPSK_08361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssck04121
]
SPSK_08361
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_08361
Ubiquitin system [BR:
ssck04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
SPSK_08361
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
SPSK_08361
TCR (transcription coupled repair) factors
Cul4-CSA complex
SPSK_08361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
DUF5050
Motif
Other DBs
NCBI-GeneID:
27670238
NCBI-ProteinID:
XP_016587069
UniProt:
A0A0F2M3V9
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MAYVAPVHRPSSIRHALRIKLFSAEEDCLVISRANRIEIWRFTEHDDLALFHSQKIYGTV
AMLEALRPKDSDTELLFVGTDRFDYFTLVWDDARQGLDTIDNFHDVGEKHLRDSQSQDRC
IVDPSGRYMALLLWEGVLCVLRLKSRRDQARNIDWMDQVRLSELFIKACTFLYSETGHPK
IAFLYQSQSERRDAKLSSYRLTSDDRDAVVSRFDATREREINLDLDDIGAALLIPVETSE
SERRHNVRKTSNNAPAEPHLGGLLVVGETSLVYIDDTTQATKTVTPRTPAVYVAWARFDS
THYFLADDQGVLRLLTIITDGQVVKKIEVSPIGKTSIASSLVYYPSRSLLFVGSHHGDSQ
LYRIKLTDDSTDDTMTDEPGKSATTANDKASGKKHEYCELVQTFSNIGPILDFTIMDMGN
REDGKANEYASGQARIVTGSGVNKGGSLRSVRSGVGLEDIGILGDFSNVRALFPLRRRPT
ASGKMDTLVVSLLTETRVFTFDANGEVEEVTFFPGIQFDEETLLAARAKDNSFLVITAKS
VTLSDGDNGDTLASWSPQDGKAISLASANDRWALLSIEGKLLVSLRIDKGLTLAAEKDFG
DDQIAAIHAAPQFLDTGVVGTWMVGTVAVVDLATLQPTQASVSVRQKEDTASVPRSLALA
QVMPTHLSGPTLFVAMDDGTVVTFSVSKEDRTLHSKKSVVLGTRRANLYPLPQPDGTYSI
FATTEHPSLIYGSEGRIVYAAVTAQDANVVCPFDSDDFPDAIVVASLTSIKIARPDTQKQ
THVQTIQMHETIRRIAYSPVEKVFALGCIGANVVNGIEVPTCSIKLVDETMFRTIGRPLP
LDGEQGELVESVIRAEMLDSQGHPAERFLVGTSYVPQAAVDDGGSQGRVIVVGVDSERNP
YIVSTHRMRGPCRRLAVLDGKIVLGLSKTVIISDYIETSNMSAKLKKIASFRAATFISDL
AVYGNYIAVGDMMKSTTIVEYIPATRGSNDDDDDREKDVARIGGTSAGADSMDVDDNDGE
KKATPATPAKLEGRARYYQASWVTAVCHIEGESWLEADGFGNLSVLERNANGVTEEDRRK
LRATSEMNLGDMVNRMQPISVESNPNAMVHPKAFLATVEGALYMFGTVSPAAQDLLMRLQ
AKLDATVTGLGKTSFASYRGFRNQEREAAEPIRFIDGEMLERFLDLDDETQKQVAQGLGP
SVEDLRSSIEELKRLH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcctacgtcgcaccagtgcaccggccaagcagcatccgacatgctctccggataaag
ctgttctcagcggaggaggactgtttagtaatatcgcgagcaaaccgaattgagatctgg
cggttcaccgaacacgacgacctggccctcttccactcgcaaaagatctacggcaccgtg
gctatgctggaggccctgcggcccaaggactccgacaccgagctgctttttgttggtacc
gaccgcttcgactactttaccctcgtctgggacgacgccaggcaaggcctcgacaccatt
gacaacttccacgatgtcggcgagaagcacctgcgtgactcccagagccaagaccgctgc
atcgtcgacccctcgggacggtacatggccttgcttctctgggagggtgtcctgtgcgtg
ctacggctcaagtcccgtcgtgaccaggcccgtaacattgactggatggaccaggtgcgc
ctgtcggagctctttattaaagcgtgcacctttctgtacagcgagacgggccaccccaag
attgcgtttctgtaccagtctcagtctgaacggcgcgacgccaagctgtcctcctaccgt
ttgacgtccgacgaccgcgacgccgtcgtctcgcgctttgatgctacccgcgagcgcgag
atcaatctcgacctagacgacattggcgccgctctgctgatccccgtcgagacgagtgaa
agcgagcgccgccacaacgtgcgcaagaccagcaacaacgcaccggctgagccacacctc
ggcggcctgctcgtcgtcggtgagacgagtttggtgtatatcgacgatacgacgcaggcg
acaaagaccgtgacccctcgtacaccggctgtctatgtcgcctgggcgcgctttgacagc
acccactactttttggctgacgaccagggtgtactacgactgctcacgattatcacggat
ggccaggttgtcaaaaagattgaggtctcccccattggcaagacgtccattgcctcgtcg
ttggtgtattatccgtctagaagcctgttgtttgtcggatcgcatcacggcgactcccag
ctctaccgcatcaagttgaccgacgacagcaccgacgacaccatgacagacgagccgggc
aagtcggcgactactgccaacgacaaggccagcgggaagaagcacgagtactgtgagctg
gtccagaccttttctaatattggccctatactcgattttaccattatggacatgggcaac
cgcgaagacggcaaggccaacgagtatgcgtctggccaagctcgcattgttactgggagc
ggcgtaaacaaaggtggcagtctccggtcggtgcggagcggcgtaggcctcgaagacatt
ggcatcttgggcgacttttcgaatgtacgtgccttgtttccgctccgcaggcggccgact
gcgtccggtaaaatggacacgctggtcgtgtccttgttgaccgagacacgtgttttcacc
tttgatgccaacggcgaagtcgaagaggtgaccttcttcccaggcattcaatttgacgag
gagactctgcttgccgcccgggcaaaggacaattcttttctcgttatcactgccaagtct
gtcacgctgtcagacggagacaacggcgacaccttggctagctggtcgccacaagacggc
aaagctatttccctcgcctcggccaacgatcggtgggcgttgctctctatcgagggcaag
cttctcgtatcgctccgcatcgacaagggccttacactagcagctgagaaggactttggc
gacgatcagattgccgccatccatgctgcaccgcagtttctggataccggtgtcgttggc
acatggatggtgggaaccgttgccgtcgtggatcttgcgacgcttcagcccacgcaggca
agcgtctcggtgcgccaaaaagaggacacagcatccgtgccgcgcagcctagcgttggct
caggtcatgccgacgcacctttctggcccgacgctgtttgtcgccatggacgacggtacg
gtggtcaccttttctgtctctaaagaggatcgcacgctgcactccaagaagagcgtcgtc
ctcggcacccgccgtgccaacctctaccccctccctcaaccggacggcacctactccatc
ttcgctacgaccgagcacccaagtcttatctatggctccgaaggcagaatcgtctatgct
gctgtcacagcgcaggatgccaacgtcgtctgcccctttgacagcgacgacttccccgac
gccatcgttgtggcttcccttacatccatcaaaatcgcccgcccggacacccagaagcag
acccatgttcagaccatccagatgcacgagaccatccgccgcatcgcctactctcccgtc
gagaaagtctttgcactcggctgcatcggggccaatgtcgtcaatggcattgaagtgccg
acgtgctccatcaagctcgtcgacgagaccatgttccgcaccattggcaggcctctgcca
ctcgacggcgagcagggcgagctggtggagtctgtcatccgtgccgagatgctcgactct
cagggtcaccctgccgagcgcttcttggtgggtacgagctacgtaccccaagcagctgtg
gacgacgggggtagccagggccgcgtgattgttgtcggtgtcgattccgagcggaatccc
tacattgtctcgacgcacagaatgcgcggaccctgtcgccgtctggccgtcctcgacggc
aagattgtgctgggtctcagcaagacggtcatcatcagcgactacattgaaacaagcaat
atgtcggccaagctgaagaagattgcttcgttccgcgccgcgacgtttatttctgatctg
gccgtttacggaaactacatcgccgtcggcgacatgatgaagtcgacgacgatcgtggag
tacattccggcgacacgcggcagcaacgacgacgacgatgatcgagagaaagatgtggcc
aggattggtggcacgtctgccggcgccgacagcatggacgttgacgacaatgacggggag
aaaaaggcaacgcctgccacccccgccaagctcgaaggccgcgcgcgctactaccaggcc
agctgggtcaccgccgtctgccacattgaaggcgagtcctggctcgaggccgacgggttt
ggcaatctctcggttctcgagcgcaacgccaacggcgtcactgaagaagaccgtcgcaaa
ctgcgcgccacgtccgaaatgaacctaggcgacatggtcaatcgcatgcagccgatttcc
gttgagtccaaccccaacgccatggtgcaccccaaggccttcttggcgaccgtggaaggc
gccctgtacatgttcggcacggtatcgcccgccgcccaagatcttttgatgcgtctccag
gccaagctcgacgccaccgtcaccggcctgggcaagacgtcctttgcgtcgtaccgcgga
ttccgcaaccaggagcgcgaggccgccgaaccaatccggtttattgacggcgagatgctg
gagcgattcctggatctggacgacgagacacagaaacaggtggcccagggtctgggcccg
agcgttgaggatcttcgtagcagcatcgaagagctcaagcgtttgcactga
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integrated database retrieval system