Sporothrix schenckii: SPSK_08398
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Entry
SPSK_08398 CDS
T05555
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssck03041
]
SPSK_08398
Spliceosome [BR:
ssck03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
SPSK_08398
Other components
Complex C specific factors
SPSK_08398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
27670273
NCBI-ProteinID:
XP_016586916
UniProt:
A0A0F2M605
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MDFSFGAAAAAGNVAKGAAGADAYSSSDSGSDDDGNTYRMPSTNPGDGEFGDFNPRKRRR
TGRNAKESAALGIFGSDSEDDHTQRRWKQRQPLRKQGMSFVSSGAKKESDDEDEDEESEE
DEKDDHLGDDGDNNDESEEDGRFGLSSAAQRAAGVQDGEDYTKQDGEEDDYDDETPGIGL
GFGSVRGGLGRGASDNASKSAGGAGLGFVPASFQSSRNGGRNSHSNQRRPPPSFQPASSA
SHDDADIDTQNPLGQGFVPSSAYDPVLRPQGQSTKEPPLVARPSAFSSKPTRGGAGGGAR
GGSSFNAKSFGARMMAKMGFVEGRGLGSEGQGRNIIIEANLRPQGVGLGAVREKSEKERQ
EEKRQARLRGEAVIDSDEEERKVNAAAAARRKKALASGGSGSGGTNSGTSTPRRAKKKYM
TMDEARRAAPGLHIPEAFTPILDMTGPGKRLLTSSSGLMTPTSGTAAGTASAASPFVSGS
PAAGAETAEQVEARKLARRAQSDFMAILEEWQSLQNRKAFAELQAQQARQELAELEVNLQ
AHTAMTSAFSKLSVDKADHSATAGRMRNGEGDTVDTADATDTTETTNTWRPTWDHTIAQL
QAAAETIPPASMSEMRDALADICVAALHPLFKQAIEAWAPLQDPNQHLVDGLLSIQGLLG
FGPDAAAARTLLEADEAAKGRRLDPFVFRKHKAATATPYEAVMYTLWLPHVSAAVRTWDA
VHDADSVLALYEAWLPVLPGFVRAHLLEQDIVRRLDEAVARWEPKRRRHSAQTTQNLPHL
WLFPWLPYLPARHVDPSAADGLVVQVKRKFRQLIDVWEFYRGVVPGLRQWKAVLRPSGRG
AGDAASTSAASSASSARDQWRPLVMSHVLPSMARYVRAQFRVDPRDQAGYLEVITGEFQW
LALLAPEMVGEVMVADVFPMWHEALYHLLTDADESLDRIGQWFQWWADNVFPASIQRLPS
VAAEFERGLGMINEALDIGVVDATTGVYDADRVRQFLAPPSKGPALKASSSLSSSRHNGH
HSRYHHGHHRQADKETPTSTPAAPENEEMSIRHYVEEWCESNDVQFIPERKKVHAEGRPL
YRLTTRGDGRGGVLAYFKGVRLYAETKKGPLEIRVDREDDWTKLLSMAQ
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcgtttggtgcggcggccgccgccggcaacgtggccaagggcgcggccggc
gcggacgcctactcgtcctcggactcggggtcggacgacgacggcaacacataccgcatg
ccctcgacgaaccccggcgatggcgagtttggcgacttcaacccgcggaaacggcgacgg
acggggcgcaacgccaaggagagcgcggcgctgggcatctttggcagcgacagtgaggac
gaccacacgcagcggcgatggaagcaacggcagccgctgcggaagcagggcatgagcttt
gtgtcgtcgggcgcgaagaaggaaagcgatgacgaggatgaggatgaagagagcgaagag
gacgaaaaggacgaccatcttggcgatgatggcgacaacaacgacgaaagcgaagaggac
ggccggtttgggctaagcagcgccgcgcaacgcgcagccggtgtgcaagacggcgaagac
tacacgaagcaagacggcgaggaggacgactacgacgatgagacgccgggcatcggccta
ggctttggcagcgtccgcggcgggctcgggcggggtgcctccgacaacgcatccaaatcg
gcgggcggcgccggtcttggcttcgtgccggcctctttccagagcagtcgaaacggaggc
cgaaacagccacagcaaccaacggcgaccaccgccgtccttccagccggccagctcggcg
tcccacgacgatgccgacatcgacacgcaaaacccgctcggccagggctttgtcccgtcc
tcggcgtacgaccccgtcctccgcccccagggccagtcgaccaaagaaccgcctctggtg
gcacggccgagcgccttttcttccaaaccgacacgcggtggcgctggtggcggcgcccgt
gggggcagcagtttcaatgccaaatcgtttggcgcccgcatgatggccaagatggggttc
gtcgaggggcgcggtctcggcagcgagggccagggccgcaacattattatcgaggccaac
ctgcggccacagggtgtcggtctgggcgcggtgcgcgagaaatccgaaaaggagcgccag
gaagagaagcggcaggcgcgtctgcggggcgaggccgtcatcgactcggacgaagaggag
agaaaggtcaatgcggccgcggctgcgcgccgaaagaaagccttggcgagtggcggcagt
ggcagcggcggcacgaacagcggcaccagcacgccgcggcgcgccaagaaaaagtacatg
accatggacgaggccaggcgggcggcgcccggtctgcacatccccgaagcgtttacaccc
attcttgacatgacgggaccgggcaagcgactgttgacatcgtcgtcggggctcatgacc
ccgaccagcggaacggcggccggcacagcgtccgcagcgtctccgtttgtcagtggctca
ccggctgcaggcgcagaaacagctgagcaggtcgaggcgcggaagctggcacgacgcgca
cagagcgatttcatggcgattctcgaggagtggcagagcttgcagaaccgcaaggcgttt
gccgagctgcaggcacagcaggcgcggcaggaattggctgagctcgaggtcaacctgcag
gcgcacacggccatgacgagtgccttttccaagctgtcggtagataaagcggaccacagt
gccacggccggccgcatgcgcaatggcgaaggtgacacggtcgatacagccgatgcaacc
gatacgaccgagacaaccaacacatggcgaccgacatgggaccacacgattgcgcagctg
caggccgctgccgagaccatcccgccagcgtctatgagcgaaatgagagacgcgctggcc
gacatttgcgtggcggccctccacccgctcttcaagcaggccatcgaggcctgggcgccg
ctccaggatcccaaccaacacctggtggacgggctgctgtcgatccagggcttgctcggc
tttggtccggacgcagcagcggcgcgtacgctgctcgaggccgacgaagcggccaagggc
cgccgcctcgatccctttgtcttccgcaaacacaaggcggccacggccacgccctacgaa
gccgtgatgtacacgctgtggctgccgcacgtgtcggcggccgtgcgcacctgggacgcc
gtgcacgacgccgacagcgtgctcgccctctacgaggcctggctgcccgtgctgcccggc
tttgtgcgcgcgcacctgctcgagcaggacattgtgcgccgtctcgacgaggcggtggcc
cgatgggagcccaagcggcgccggcacagcgcgcaaacgacgcagaacctgccgcacctc
tggctcttcccctggctgccgtacctgccggcgcgccacgtcgacccgtccgccgccgac
ggcctcgtggtccaggtcaagcgcaagttccggcaactcattgacgtctgggaattttac
cggggcgttgtgccgggtctacggcaatggaaggccgttttgcggcccagcggacgtggt
gccggtgatgccgcgtcgacgtcggctgcctcgtccgcctcgtctgcgcgcgaccaatgg
cgtccgctcgtcatgtcccacgtcctgccgagcatggcgcgctacgtccgcgcccagttc
cgcgtcgacccgcgcgaccaggccggctacctggaggtgattacgggcgagttccagtgg
ctggcgctgctggcgcccgagatggtcggcgaggtcatggtggccgacgtgtttcccatg
tggcacgaggccctgtaccacctgctgacggacgcggacgagtcgctggaccgcatcggg
cagtggttccagtggtgggccgacaacgtgttcccggcgtcgatccagcggctgccgtcg
gtggcggccgagtttgagcgtgggctgggcatgatcaacgaggcactggacattggcgtc
gtggatgcgacgacgggtgtctacgatgccgaccgtgttcgccagttcctggcgccgccc
agcaaggggccggccctcaaggcgtcatcgtcgttgtcgtcgtcccgccacaacgggcac
cacagtcggtaccaccatggccaccaccgacaggccgacaaggagacgccgacatcgacg
ccggccgcccccgaaaacgaagaaatgtccatccgccactacgttgaggaatggtgcgag
tccaacgacgtgcagttcatccctgagcgcaaaaaggtgcacgccgagggccgtccgctg
tatcgcctgaccacgcgcggcgacgggcgcggcggcgtgctggcctactttaagggcgtg
cgcctgtacgcggagacgaaaaagggccccttggaaatccgcgtggaccgggaggacgac
tggacaaagttgttgtccatggcgcagtag
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