Sporothrix schenckii: SPSK_08575
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Entry
SPSK_08575 CDS
T05555
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ssck
Sporothrix schenckii
Pathway
ssck03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPSK_08575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_08575
03036 Chromosome and associated proteins [BR:
ssck03036
]
SPSK_08575
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SPSK_08575
Coactivators
SAGA/TFTC/STAGA complex
SPSK_08575
Chromosome and associated proteins [BR:
ssck03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
SPSK_08575
STAGA complex
SPSK_08575
TFTC complex
SPSK_08575
SAGA complex
SPSK_08575
SLIK complex
SPSK_08575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
LisH
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
eIF2A
Beta-prop_Vps41
Beta-prop_SPT8
VPS8_N
Beta-prop_IFT122_1st
PROPPIN
ARMC9_LisH
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
27670445
NCBI-ProteinID:
XP_016587560
UniProt:
A0A0F2M715
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MSASNGNNGQHGTGTGPSAAGGSGQSQALTNSPSDLNKIVTDYLLKKGFTKTEATFRKES
SNVNPDGRPIRRKVDDMGPERYPKSFHLLKDWIENGLDLYKFELRKLLWPVFVYSFLDMV
EQNFVQESKLFLKDVWSDFENTHADDLRAFETIQLPIHVTENPTTKIYRGNKYRIPLNQH
VSGQLFGFLERQEDAGGSVITLLLQTYCQVDSTARGPIEPYSFEAIARRAQNADLDEADV
REGIPGVFTGVSNRDILDTHAALKLGPLPMELELRDDVRAELEEQDQRQPPAAGVPSLVS
EFDAKIKQEEGADGPSRTDLPLPPSRARDVVIEMQKIRETRDRFQIEDRTGGVGVPVSVC
MFTFHNTCGSVSSMAFSKDHQLVAYGSMDSYIRVWSIDGKALKSRMLGDTDKTNNRKLIG
HSGPVYGLSFSDAVTGLKYNPFDEKQPPVETDSKLLLSSSSDGTVRLWSLDVWSCLCVYK
SHTGPVFRVLWSPHGHYFLTAGWDKTVRIFTQDHASAQRLLVGHNTSISAIAWHSNGTYV
FSASDETDKTIRMWSAIKGDCVRVFTGHTDYISALECAPNGRILASADAGGTIIIWDITK
GTRIKRCRGHAKGGISSLSFSAESTVLVSSGLDGTLRLWDINLPKDASKTPAALGTAPGS
ALASSNQSGDIGGTGGESLTGASSQDRSITVGGQPPSPATAATAAGAASGTNNGGAGKKK
GKEVTITPDQISAFATKKTPILRAEFTRMNLVVASGCFDP
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtcgaacgggaacaacggccagcatggcactggcacagggccgtccgctgct
ggtggctcggggcaatcccaagcattaacaaactccccgtctgatttgaacaagattgtc
acagactatttgctgaagaagggattcacgaaaaccgaagcaacatttagaaaagagtca
tctaatgtgaatccagacggccggccgattcggaggaaggttgatgacatggggcctgaa
cgctaccctaagtcgtttcatcttctaaaggattggatcgagaatgggcttgatttgtac
aagtttgagttgaggaagcttttatggcctgtttttgtctactcctttttagacatggtc
gaacaaaactttgtacaggagtccaagctgtttctaaaagacgtttggtctgattttgaa
aacacccatgcagacgacttgcgcgcgttcgagacaattcagctccccatccacgtcaca
gagaatcccacgactaagatctaccgtggtaataaatatcgcattccactcaatcagcat
gtcagcggccagctctttgggtttcttgagcgacaagaagatgcgggtggtagtgttatc
acactgttactacaaacatactgccaggtcgactcaactgcccgcggaccgattgagccc
tatagcttcgaggcaattgcccgccgagctcagaacgctgatctagatgaagctgatgtt
cgggagggaatcccgggcgttttcacgggtgtcagcaaccgggacatcttggacacacac
gcggcgttgaaactgggcccacttcccatggagctggaactacgcgatgatgtgcgtgcc
gagcttgaggaacaagaccagcgacaaccacccgcggcgggtgttccgtctcttgtatca
gaatttgatgcaaagatcaagcaagaggagggagcagacggtccctcacgtaccgacctt
ccccttccgccatctcgtgccagagatgttgtcatcgaaatgcagaagatacgcgagacc
cgagatcggttccaaattgaagatcggaccggaggtgtcggcgtcccagtttcagtgtgc
atgttcacattccacaacacatgcggaagcgtttcgtcaatggccttttcaaaggatcat
cagcttgttgcttatggctcaatggattcgtatatccgcgtatggagcattgatgggaag
gccttgaagagcaggatgctcggggacacagacaaaacaaataaccggaagctcattggg
cactcaggccctgtgtatgggctctccttttccgatgccgtgactgggcttaaatacaac
ccatttgacgagaaacaaccgcccgtcgaaacggactcaaagcttctcctatcctcctcg
tccgacggcacagttcgtttgtggagcttggatgtctggtcctgtctctgtgtttacaaa
tctcatacaggtccggtgttccgggtactttggagcccccacggccattactttctgact
gctggttgggataagaccgttcgtattttcacacaagatcatgcctcagcacagcggctg
cttgtaggccacaacactagcatatcggcaatcgcctggcactccaacgggacttacgtc
ttttcggcatccgatgaaacggacaaaaccattcgcatgtggtccgccattaaaggcgat
tgcgtccgagtttttactggccacacagactacatcagtgcactagaatgcgcgccgaat
ggtaggatcctcgcaagtgccgacgctggagggaccattatcatttgggatatcacgaag
ggaactcgcatcaaacgatgccggggccacgcaaaaggcggcatatcgtccctgagtttt
agtgcagagtcaaccgttctcgtctctagtggcctggacggcacccttcgcttgtgggat
atcaaccttccaaaggacgccagcaaaaccccggccgccctggggacagcgccgggctca
gctcttgcctcgtcaaaccagtcaggagacattggtgggacaggcggtgagtccctaacc
ggggctagctctcaggaccgtagcatcacagttggcggccagccgccgtctccggccacg
gcagcaaccgcggccggtgcggcgagcggtacaaacaacggtggggcgggcaagaagaaa
ggaaaagaggtgacaataacacctgatcagatcagcgcatttgccaccaaaaagacaccg
attctgcgcgcagagttcacaaggatgaatctcgttgttgcaagcgggtgttttgacccg
tga
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