Sporothrix schenckii: SPSK_08638
Help
Entry
SPSK_08638 CDS
T05555
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ssck
Sporothrix schenckii
Pathway
ssck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSK_08638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_08638
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPSK_08638
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SPSK_08638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
OCC1
WKF
Transcrip_reg
Motif
Other DBs
NCBI-GeneID:
27670506
NCBI-ProteinID:
XP_016587278
UniProt:
A0A0F2M4Q4
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MAARKLQQEVDKCFKKVTEGVAEFDAIYEKIEQSNNPAQKEKLEDNLKREIKKLQRLRDQ
IKTWAAGNEIKDKGPLMEYRRLIETQMERFKAVEKAMKTKAYSKEGLSAATKLDPKEQAK
VAKAEFIGNQVDELEQQIETLEAEGEAIQATTKRGKMHGAKAERMAQIERTIERHKWHQG
KLELIRRSLENGGVDVDQVADLEESIRYYVTDNMQSDFIEDDTMYDDLNLEENEDAFGMN
LDNDKVSSQDNQSIQDDTPEIESKPAAPPTAPAATGKGRQGVSEAAASGRRPSAQLKSPL
PALATLHTPLPTLSNGSVASTMKPASIPTRPAGEVLKYASAAAAAAASDKLNLGISPLPP
PVGVSGPVSSSQLPTAASIPAVQASKIASATNSPKPTPAQPSALSDKSYSPAVSVAAPAS
ASTAPAAAPTKAENTRRNKNAAVAAAASAASAASAASAVSAASAASAASAASAASATSAA
TPAPAEPTETTTKASSQTNGFTNGAKHGTEASATDEQERRDEESIYHLPASLQDLVDSFE
VTKSLPAVANQATTLRQLSTSANNPPEAMDSEPPRRYVPDMRYNSTSNYPQEPLPLLDDP
RLYNRIDPDTLFYVFYYKQGTYQQYLAAKALKDMSWRFHKQYQTWFQRHEEPKSITEEFE
QGTYRFFDYESTWMNRRKADFKFVYKFLEDDV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacgaaaactccagcaggaggtcgacaagtgcttcaagaaagtgaccgagggt
gtcgccgagttcgacgccatctacgagaagattgagcagtccaacaacccggctcagaaa
gagaagctggaagacaatctcaagcgtgaaatcaagaagctgcagcgtttgcgcgatcag
attaagacatgggcagccggcaacgagatcaaggacaagggtccgcttatggagtaccgc
aggttgattgagacgcaaatggagcgcttcaaggctgtagaaaaggccatgaagacaaaa
gcatactcgaaagaaggcttgtcagcggcgacgaaacttgatccgaaagagcaggccaag
gtcgcgaaggccgagtttatcggcaaccaagtagacgagctggagcagcagattgagaca
ctggaagcggagggcgaagccatccaagcaactacgaagcgcggcaagatgcacggtgcc
aaggccgaacgcatggcacaaattgaacgtaccattgaacgacataagtggcaccagggc
aagctggagctgatccgccgctcactcgagaacggaggcgtcgacgtcgaccaggtcgcc
gacctcgaagagagcatacgctactacgtcaccgacaatatgcagagcgacttcatagag
gacgacaccatgtacgacgacctgaacctcgaagagaacgaagatgccttcggcatgaac
ctagacaacgacaaggtctcatcgcaagacaaccagtccatacaagacgacacgccggaa
atcgagtccaagcccgcggcaccgccaactgcaccggcggccacgggtaagggacgacaa
ggggtatcggaggcggccgcgtctggacggagaccctctgcacagctcaagtcgccatta
ccagctctcgcaacgctgcatacgccgctgccgactctgagcaatggatccgtggcgtct
acaatgaagcctgcatccataccaacgcgacccgccggcgaagttctcaagtatgcgtca
gccgccgccgctgctgccgcgagcgacaagctgaatctgggcatttcgccgttaccgcca
ccggtcggcgtctccggcccagtctcctcctcacagctgccgaccgccgcgtccattcca
gccgtccaggccagcaagattgccagtgcaaccaactcgcccaaaccaacacccgcgcag
ccgtctgcactatccgacaagtcctactcgcctgccgtctccgtggcggcgcccgcgtcc
gcttcaacagcacccgctgcggcgccgaccaaggcagagaacacaagacggaataagaac
gcggcagtggcggcagcagcatcagcagcatcagcagcatcagcagcatcagcagtatca
gcagcatcagcagcatcagcagcatcagcagcatcagcagcatcagcaacatccgcggca
acacccgcgccggccgagccaacagagacaacaaccaaggcttcctcgcaaacgaatggc
tttaccaatggtgccaagcatgggacggaagcatccgctacagacgagcaggaacgccgg
gacgaggagtcgatataccacctgcctgcgtcgctgcaggatctggtcgactcgtttgag
gtgacgaagagcctaccagccgtggccaatcaggcgaccaccctgcgccagctgtcgacg
tccgcgaataatccgcccgaggccatggactcggagccgccgcgacgctacgtgccggac
atgcgttacaactcgacatccaactacccgcaggagccgctgccgctgctggacgaccct
cggttgtacaaccgcatcgacccggacacgctcttctacgtgttttactacaagcaggga
acctaccagcagtacttggccgccaaggctctcaaggacatgagctggcgcttccacaag
cagtaccagacttggttccagcggcacgaagagcccaagagcatcacggaggagtttgaa
cagggcacgtaccgcttcttcgactacgagagcacatggatgaacagacggaaggccgac
ttcaaattcgtctataagttccttgaggacgacgtgtag
DBGET
integrated database retrieval system
