Sporothrix schenckii: SPSK_08723
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Entry
SPSK_08723 CDS
T05555
Name
(RefSeq) ATP-dependent RNA helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_08723
03041 Spliceosome [BR:
ssck03041
]
SPSK_08723
03036 Chromosome and associated proteins [BR:
ssck03036
]
SPSK_08723
Enzymes [BR:
ssck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPSK_08723
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SPSK_08723
mRNA cycle factors
Common to processing body (P body) and stress granule
SPSK_08723
Spliceosome [BR:
ssck03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SPSK_08723
Chromosome and associated proteins [BR:
ssck03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SPSK_08723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
ResIII
Motif
Other DBs
NCBI-GeneID:
27670588
NCBI-ProteinID:
XP_016588163
UniProt:
A0A0F2M781
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MSAAWNEGPDQGGTPADSGWKAEVVALDGGGGDGGQIRDHGFDIAVKPELYPGFDGERQQ
IKDAGWIESTPYNYEAEQDPTKVLRDWAGNATVYEWSGEEGDVGPPRKSSSASFLETQRN
APVLVLTFRPTFAASLFRLPYYVLLYRLAEIKVTQEGETRISPFYDFDKAGLHPAMRRNV
ELAGYKVPTPIQMYCLPAIINGHDVMGIAQTGSGKTAAYLIPILNHLMGKAKKLAAARPN
PATYRPGLDAPARAEPLVVIVAPSRELGIQIFNEARKFCYRTMLRPCVIYGGGPIRGQLE
QLSRGCDVLIATPGRLIDIMNRPNHLSLRRVKFMVLDEADEMLQDDWVEDLSRILSGDQD
DGDIKYMMFSATFPKRLRDLAKEYLANDHCRLRVGRAGSSHGNIQQVISYMDPANKRKAT
VELLNSIPPGRTIIFVNRKLTADELDDFLYNLGLPCTSIHAGRTQMEREDAMRAFRGGQC
PILIATGVAARGIDVHNVNHVINYDLPTLDHGGIEEYVHRIGRTGRIGHRGLATSFYTDR
DEPIASVLTRTLLETKQEIPDFLEMYIPEGEARENLKFEADSDFEEFTAGDGGDDGWGAG
GDACDSWDAPADGDVGGTGWGAGDDDANDVPVVGWS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgcctggaacgaaggccctgaccagggtggcactcctgctgacagtggttgg
aaagccgaggttgtggctcttgatggtggtggtggcgatgggggtcagattcgggatcat
ggctttgacattgccgtcaagccggagctctaccccggcttcgacggtgagcgccagcag
atcaaagacgctggctggattgagagcaccccgtacaactacgaggccgagcaggacccc
accaaagtcctccgcgactgggccggcaacgctacagtctacgagtggtccggcgaggaa
ggcgacgtcggcccgcctcggaagagctcgagcgcgagctttttggagacccagagaaac
gctccggttctggtattgacttttcgacctacctttgctgcttctttgtttcgcttacca
tattacgtgcttctatatagacttgctgagatcaaggttacccaggagggcgaaactcgc
atttctcctttctacgactttgacaaggctggtctccaccctgcgatgcgtcgcaacgtc
gaattggccggctacaaggtgccaactcccatccagatgtactgtcttcccgccatcatc
aatggacacgacgtcatgggtattgctcaaactggttccggcaagacggccgcctacctc
attcccatcctgaaccacctcatgggaaaggcaaagaagcttgccgctgctcgccccaat
ccggcgacctaccggccgggtctagacgccccggcgcgtgctgagccgctggtcgtcatt
gttgcccccagccgtgagcttggaattcagatcttcaatgaggcccgcaagttctgctac
cgtaccatgctccgcccctgcgtaatttacggcggtggtccgatccgcggtcagctggag
cagctcagccgcggatgtgatgttctcattgccacgcctggtcgtctcattgacatcatg
aaccgccctaaccatctgtcactccgtcgtgtcaagttcatggtccttgacgaggctgat
gagatgctgcaggatgactgggttgaggatctcagccgcattctctcaggtgaccaagat
gacggtgacatcaagtacatgatgttctcggccacgttccccaagcgtctgcgggatctt
gccaaggaataccttgcgaacgatcactgtcgtctgcgtgtcggccgtgctggcagctct
cacggcaacatccagcaggtgatctcgtacatggatcctgcaaacaagcgcaaggctacc
gttgagcttctcaactccatcccgcccggcagaaccatcatatttgtcaaccgcaagctg
actgccgacgagcttgacgacttcctgtataaccttggcctcccctgcacctcgatccat
gctggccgcacccagatggagcgcgaggacgccatgcgtgcgttccgtggcggtcagtgc
ccgattctcattgctaccggtgtcgctgctcgcggaatcgatgtgcacaatgtaaaccac
gtcatcaactacgatctccccactcttgaccacggcggcattgaggagtacgttcaccgt
attggacgtactggtcgcattggtcaccgcggtcttgcgacgtcgttctacaccgaccgg
gacgagcccattgcgagtgtccttacgcgcactctccttgagaccaaacaggaaatcccc
gatttcttagagatgtacattcccgagggcgaggcccgcgagaacctcaagttcgaggct
gactcggacttcgaggagttcactgccggcgacggcggtgacgacggttggggtgccggg
ggcgatgcatgtgactcgtgggacgctccggccgatggcgatgtcggtggcaccggttgg
ggtgccggcgacgacgatgccaacgatgtaccggttgttggttggtcgtaa
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