Sporothrix schenckii: SPSK_08918
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Entry
SPSK_08918 CDS
T05555
Name
(RefSeq) far upstream element-binding protein
KO
K13210
far upstream element-binding protein
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_08918
03041 Spliceosome [BR:
ssck03041
]
SPSK_08918
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
SPSK_08918
Spliceosome [BR:
ssck03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SPSK_08918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
MOEP19
KH_KHD4_2nd
Motif
Other DBs
NCBI-GeneID:
27670780
NCBI-ProteinID:
XP_016586799
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MCPFLAAQKPADSNTPPQGQQAYPPPPGTAPGTGPYAPSASSGFPKPTTSGSLDLSAPAV
VGGGNVSIQEAIARAKAHAAQNGVASYDRPITYAPPPATAPPPPGGPPEGHRYRSSRSRS
PPPARRGGNDYRENHNPYRDERRDYGGGGGRSHPYSPAGHHGDRGSDRHNDSFSPRGAHG
GRRDRSPGRGEGGGAGSNSEVIEVQAGLVGLIIGRQGENLRRIEGETQCRVQFLAPANQE
DPMRQCKISGQPPNRAEAKAAIFKMVDDSAGPGPGGRFGGPGGPRGGQSERMGQQVVPGE
GEELVQIMIPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVSGLRPVNLIGGRAET
THAKELIMEIVDSDTRNGGPGGPPSGGGPGGPPFRQGGGGGGGGYGGGGGGPGGGYGGGG
GGDRINDSMFVPAEAVGMIIGKGGETIREMQSSTGCKINVSQTPGANENEREIGLIGTQE
AIERAKIAIEEKVEAVRQKNSGGGYGGPGGGRGRGREGGDGGGYRQQRDYDSHGGYGGGG
RGGGDGGPSRGGPGGPGGQPTSDDPNADPYAAYGGYAAYVALWYQALAQQQQSGGGAPPP
APGQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccttttctagcggcccagaaacctgccgactcaaatacgccgccgcaaggccaa
caggcgtatcctccaccacctggcactgcgcctggtacgggtccttatgcgccttctgca
tcatctggctttccgaagccgacaacaagcggtagcctggacttgagtgcgccggccgtc
gtaggcggcggcaacgtcagcatccaagaagccattgcgcgtgccaaggcccacgccgcc
cagaacggtgttgcctcgtacgacagacccatcacatatgcaccgcctcctgctacggca
ccaccgccgccaggtggacctcctgagggccatcgctaccgtagctcgcgctcccgctct
ccacctcctgcccggagaggcggcaacgactaccgcgagaaccacaatccctaccgcgac
gagcgccgcgactacggtggcggcggcggccgtagccacccctactcccctgccggacac
cacggcgaccgtggcagcgaccgccacaacgactcattctcgccacgtggtgcccacggt
ggccggcgcgaccgctcacctggccgtggcgagggcggtggtgcgggcagcaattccgag
gtcatcgaggtccaggccggtctggtcggcctgatcattggccgccagggcgagaacctg
cgccgcatcgagggcgagacccagtgccgcgtgcagttcttagcccctgccaatcaggaa
gacccgatgcgccagtgcaagatttccggccagcctcccaaccgcgccgaggccaaggct
gccatcttcaagatggtggacgacagcgctggtcctggtcctggcggccggtttggtggt
cctggtggtccccgtggcggccagagcgagcgtatgggccagcaggtggtgcctggcgaa
ggcgaggaacttgtccagatcatgattccggaccggaccgtgggcctgatcattggccgc
ggcggcgagaccattcgcgatctgcaggagcggagcggttgccacatcaacatcgttggc
gagtctaagagcgtcagcggtctgcgtcctgtcaaccttatcggcggccgtgcagagacg
acgcacgccaaggagctcatcatggagattgtggacagtgacacccgcaacggcgggcct
ggtggtcctcctagcggtggtggccctggtggtcctccattccggcagggtggtggcggt
ggtggcggcggctacggtggtggtggtggtggtcccggcggtggctatggaggaggtggc
ggtggtgaccgtatcaacgactctatgtttgtccctgcagaggctgtcggcatgatcatt
ggcaagggcggcgagaccatccgcgagatgcaaagcagcaccggctgcaagatcaatgtg
tcgcagacgcccggtgccaacgagaacgagcgcgagatagggctcatcggtactcaggaa
gccattgagcgcgccaagattgccatcgaggagaaggtcgaggctgtgcgccaaaagaac
agcggtggtggatacggcggtcctggcggcggtcgaggccgtggccgtgaaggtggtgat
ggcggcggctaccgtcaacagcgggactacgacagccacggtggctatggtggtggtgga
cgcggcggtggtgatgggggtcctagccgtggcggtccaggtggccctggcggccagccc
accagcgacgacccgaatgcagacccgtacgcagcatacggcggttatgcagcatacgtt
gcgctctggtaccaggcactggctcagcagcagcagagcggcggcggtgcgccccctcca
gcaccgggccagtag
DBGET
integrated database retrieval system
