KEGG   Sporothrix schenckii: SPSK_08961
Entry
SPSK_08961        CDS       T05555                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ssck  Sporothrix schenckii
Pathway
ssck03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPSK_08961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssck03041]
    SPSK_08961
Spliceosome [BR:ssck03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    SPSK_08961
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 PRP4 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_RIG_1st Beta-prop_WDR75_2nd DUF4165 Sigma70_ner
Other DBs
NCBI-GeneID: 27670820
NCBI-ProteinID: XP_016587232
UniProt: A0A0F2M8R2
LinkDB
Position
Unknown
AA seq 561 aa
MIHPSRMAYVEDAEEEGRPRGIDLASIPLEHDYDMPMTASGMPAEKASELLAQLARKKIA
ATVSVPKEDAKVREKLIEIGEPIIYFGETNQERKARLRDLLAGIIADRNAAAKAAAGGGT
GGEDVDMDDALGSSDLDDEDDEDDEDGPQEFYTSGGPDLLQARLDITAYSLPRTRRQVAL
QRAESAIPLRTHVKFRDQVKSKLRDFELQASQPIGDRNVSMTRISPSGQYVAAGNFGGSL
GLYRVPDLEHTRSLRGHTSKISGLSWFPGATLPESGVSAAAVNLASGGAEGLVNLWSLNQ
DTPVATLTGHDQRVCRVEFHPSGKFLASASEDATWRLWDVQRAGEEGTSGGGTDGGPSSA
QVLRQEGHSRGVYAVSFNTDGSLIASAGLDSIGRIWDLRSGRTAMILDGPLDGHIKPIYG
LDWAADGHRLLTASADGWIKCWDIRKVQRTGGIGAHSSTVSDVRWFKGLDDGLLGTPPGT
DPETGVQQPKVSGTFFVSGGFDQKIQIYSADDWALVQTLNGHTGPVSSVDVSRDGMWIVS
GGHDKTVKLWGRDDGSSLYST
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgattcatccgtcgcggatggcgtatgtggaggacgccgaggaggagggccggccaagg
ggcattgacctggcgagcattccccttgaacatgactacgatatgccaatgacggcctcg
ggcatgccggccgagaaggcatcggagctcctcgcacagctggcccggaaaaagatagcg
gcaacggtgtccgttccaaaggaggacgcaaaagtgcgcgagaagctcatcgagatcggc
gagcccattatttactttggcgagacgaaccaggaacgaaaagcacgactgcgggacttg
ctggcaggcataattgccgaccgcaatgcggcggccaaggcggcagcgggcggcggcact
ggcggtgaggacgtggacatggacgacgcccttggtagcagcgacttggacgacgaagat
gacgaggacgacgaggacggaccccaggaattctacacatcgggcgggcctgacctgctg
caggcgcgcctggacatcacggcctactccctgcctcgcacgcgtcggcaggtggccttg
cagcgcgccgagtcggccatcccgctgcgcacgcacgtcaagttccgcgaccaggtcaag
agcaagctgcgcgactttgagctgcaggccagccagccgattggcgaccgcaacgttagc
atgacgcgcatctcgccgagcgggcagtacgtggcggccggcaactttggcggctcgctg
gggctgtaccgcgtgcccgacctggaacacacgcgcagcctgcgcggccacacgagcaag
atcagcggcctgtcgtggttccccggcgcgacgcttcccgagtccggcgtgtcggccgca
gcggtcaatctggcctccggcggcgccgaggggctcgtgaacctgtggtcgctgaaccag
gacacgcctgtggcgacgctgacaggccacgaccagcgcgtgtgccgcgtcgaattccac
ccatcaggcaagttcttggcgtcggcgtccgaggatgctacgtggcgcctgtgggatgta
cagcgagcgggcgaggagggaacatctggtggtggcactgacggcgggccaagcagcgcc
caagtcttacgccaagaggggcactcgcgtggtgtgtacgcggtcagcttcaacacagat
gggtcgctgattgcgagtgcgggcctcgacagcatcggccggatctgggacctgcggtct
ggccgcacggccatgatcctggatgggcccctcgacggccatatcaagcccatctacggt
ctcgactgggccgccgatggccaccggttgctgactgcgtcggccgacggctggatcaag
tgctgggacattcgcaaggtgcagcgcaccggcggcatcggcgcacactcgagcacggtg
tctgacgtgcggtggttcaagggactggacgacggccttttgggcacgccgcccggcact
gacccggagacgggtgtgcagcagcccaaggtatccgggacgttcttcgtgtcgggcggc
ttcgaccagaaaatccagatctactcggccgacgactgggcgctagtacagacgctcaac
ggccacacgggcccagtatcgagtgtggacgtcagccgtgacggcatgtggattgtgagc
ggtggccacgacaagacagtcaagctgtggggccgcgatgacggctcgagtttatactct
acttga

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