Sporothrix schenckii: SPSK_09053
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Entry
SPSK_09053 CDS
T05555
Name
(RefSeq) RNA polymerase II-associated factor 1
KO
K15174
RNA polymerase II-associated factor 1
Organism
ssck
Sporothrix schenckii
Pathway
ssck04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
SPSK_09053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_09053
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
SPSK_09053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Sigma70_ECF
Motif
Other DBs
NCBI-GeneID:
27670911
NCBI-ProteinID:
XP_016588387
UniProt:
A0A0F2MC29
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MSSSASRGGGGERTVHQDFIARVRYSNVLPPPPNPPKLLEIPNTGLSSGFYTSPAFASRL
AREQPLNIEADAELGMPLDLIGMPGVFDGDETSIQSDPHPPPVHPHDRALLKPLSSLGKP
RTAESSVSFLRRTEYISSIASKGGVAGGSPFRAGINKARRPEKRSSPEPDAGTPAYVKRK
IDQSFQAAQTAARDRYSRVRHPTKKHLRLAAAYPLLPDLGAFPDSGAYVTVKFSNHPVAA
GTGVYDSRLLSGIFKAVEMADDERAALEAATKAYERDPRRNPRPQHHVQYEFYLPEKTGV
GEEFRRAFAVPEGQGQGAASEERFSFNRVRAYESIEDKEYTHATKYAEEVLLAFSEDAVA
AAPDLGARVAGGPRAALYYPVMQRTVVRSQRQKQIARGGGGLGSSNINDDDDDNDGADRP
ADRLMISVQDAPDEIKEHIALIRADPLHFEEAQMDAEGDADEDVPAPARKSNGQHRDGLE
DENDDDEDDERNGRRGSSSPNPGRGNSNGRHRSDGEDEDEDDALADEDE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtctgcgtcgcgcggcggcggcggcgaacgcaccgtccaccaggactttatc
gcgcgcgtccgctactccaacgtgctgccgccaccaccgaacccgcccaagctgcttgag
atccccaacacgggcctcagcagcgggttctacacctcgcccgcgtttgcctcacgtctg
gcccgcgaacagccgctcaacatcgaggccgatgccgagctaggcatgcctctggacctg
attggcatgcctggcgtctttgacggcgacgagacctccatacaatccgacccgcacccg
cctcccgtccacccgcacgaccgcgccctcctcaagccgctctcgtcgctgggcaagcca
cgcactgccgagtccagcgtgtccttcttgcgccgcaccgagtacatctcctccatcgcc
tccaagggcggcgtggctggcggcagccccttccgcgcaggcatcaacaaggcccgccgt
ccagagaagcgctcctcgcccgagcccgacgccggcacgccggcctacgtcaagcgcaag
atcgaccagagcttccaggccgcccagaccgccgcccgcgaccgctacagccgcgtgcgc
catcccaccaagaagcacctgcgcctcgccgccgcctacccgctgctgcccgacctgggc
gcgttcccggacagcggcgcctatgtcacggtcaagttcagcaaccaccccgtggccgcc
ggcaccggtgtctacgactcgcgcttgctgtctggcatcttcaaggccgtcgagatggcc
gacgacgagcgggcggccctcgaagccgccaccaaggcctacgagcgcgatccccgtcgc
aacccgcggccccagcaccacgtacagtacgagttctacctgccggagaagacaggcgtg
ggtgaggagttccgccgcgcgtttgccgtgcccgagggccagggccagggggctgccagc
gaggagcggttcagcttcaaccgcgtccgcgcctatgagtccatcgaggacaaggagtac
acccatgccaccaagtacgccgaggaggtcttgctggccttctccgaagacgccgtcgcg
gcggcacccgacttgggcgcgcgcgtggccggcggtccgcgggcggccctctactacccc
gtcatgcagcgcaccgtcgtgcggagccagcggcagaagcagattgcgcgtggtggcggt
ggcctgggcagcagcaacatcaacgacgacgacgacgacaacgacggcgccgaccgtccg
gccgaccgcctgatgatctcagtgcaggacgcaccggacgaaatcaaggagcacattgcg
ctcatccgtgccgacccgctgcactttgaggaagcccagatggacgccgagggcgacgcg
gacgaggacgtgcccgcaccggcgaggaagagcaatggccagcaccgtgacggcttggag
gatgagaacgacgacgacgaggacgacgagcgcaatggccgtcgtggcagcagcagtccc
aacccgggacggggcaacagcaacggccgccaccgctcagacggtgaggacgaggacgag
gacgacgccctggccgacgaggacgagtag
DBGET
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