KEGG   Sporothrix schenckii: SPSK_09499
Entry
SPSK_09499        CDS       T05555                                 
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
ssck  Sporothrix schenckii
Pathway
ssck03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPSK_09499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssck03019]
    SPSK_09499
   03036 Chromosome and associated proteins [BR:ssck03036]
    SPSK_09499
Messenger RNA biogenesis [BR:ssck03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SPSK_09499
Chromosome and associated proteins [BR:ssck03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    SPSK_09499
SSDB
Motif
Pfam: WD40 WDR55 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_WDR75_2nd Pep3_Vps18 Beta-prop_Nup120_160 NBCH_WD40 FliO
Other DBs
NCBI-GeneID: 27671348
NCBI-ProteinID: XP_016587348
UniProt: A0A0F2M4X4
LinkDB
Position
Unknown
AA seq 359 aa
MSLFGSATTPPANATVGDLKGDVAVPNPPEDSISDLSFNPNTNDPKDFMSVASWDKKVRI
YEVNTSTGASEGRLMYEHNAPVFSCHFAKDGKRVVSAGADNQARLCDLESGKNDIVAQHD
QPIRSVKFFEIDGGQQMIVTGSWDKTIKYWDLRQQQPVAAVQCQERVYTMDVKDNLLVVG
TADRYINVINLKEPTKLYKTLQSPLKWQTRVVTCFNDSAGFAIGSIEGRCAMQYVEEKDS
SSNFSFRCHRDAPQNNTTLVYAVNDISFNPAHGTFSTAGSDGTFHFWDKDAKHRLKGYPS
VGGSITSAKFNRDGKVFVYAVSYDWAKGYQGNNAQYPTKIMLHPVLPDECKPRPSVKKR
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtctctctttggttccgcgacgacgccgccggccaacgccacggtcggcgacctcaag
ggcgatgttgcggtccccaacccgcccgaggacagcatctcggacctgtccttcaacccc
aacacaaacgacccaaaggactttatgagcgtggcctcctgggacaagaaggtccgcatc
tacgaggtcaacaccagcaccggcgcgtccgagggccgcctcatgtacgagcacaacgcg
cccgtgttcagctgtcactttgccaaggacggcaagcgcgtcgtgtcggccggcgcggac
aaccaggcccgcctgtgcgacctggagtcgggaaagaacgacattgtcgcgcagcacgac
cagccgattcggtccgtcaagtttttcgagattgacggcggccagcagatgattgtcacg
ggctcgtgggacaagacgatcaagtactgggacctgcggcagcagcagcccgtggccgcc
gtgcagtgccaggagcgcgtctacaccatggacgtcaaggacaacctgctcgtcgtcggc
acggccgaccgctacatcaacgtcatcaacctcaaggagcccaccaagctctacaagacg
ctgcagagcccgctcaagtggcagacgcgcgtcgtcacctgcttcaacgactcggccggc
tttgccattggcagcatcgagggccgctgtgccatgcagtacgtcgaggagaaggactcg
agctccaatttctccttccgctgccaccgcgacgcgccgcagaacaacaccacgctggtg
tacgccgtcaacgacatttccttcaacccggcacacggcaccttctcgacggccggctcc
gacggcacgttccacttctgggacaaggacgccaagcaccggctcaagggctacccgtcg
gtcggcggcagcatcacatcggccaagttcaaccgcgacggcaaggtgtttgtgtacgcc
gtgtcgtacgactgggccaagggctaccagggcaacaatgcgcaatacccgaccaagatc
atgctgcacccggtgctgccagacgagtgcaagccccggcccagcgtgaagaagcggtag

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