KEGG   Sporothrix schenckii: SPSK_09640
Entry
SPSK_09640        CDS       T05555                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
ssck  Sporothrix schenckii
Pathway
ssck03013  Nucleocytoplasmic transport
ssck03015  mRNA surveillance pathway
ssck03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPSK_09640
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPSK_09640
   03015 mRNA surveillance pathway
    SPSK_09640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssck03019]
    SPSK_09640
   03041 Spliceosome [BR:ssck03041]
    SPSK_09640
Messenger RNA biogenesis [BR:ssck03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SPSK_09640
    TREX complex
     SPSK_09640
Spliceosome [BR:ssck03041]
 Complex C
  Other components
   EJC/TREX
    SPSK_09640
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SPSK_09640
SSDB
Motif
Pfam: RRM_1 PRC2_EED_ins FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 27671489
NCBI-ProteinID: XP_016588475
UniProt: A0A0F2M9N8
LinkDB
Position
Unknown
AA seq 304 aa
MSRRHAAVHRQSGRPPSSDSSSVPSLSVSRPWCALSNESSTRGTRVRVDNLHYDLTKDDL
EGLFSRIGPVAAVDLVYDRAGRSEGTAYVTYLEHDDARAALREFDGANAKGQPIRLSIVP
AGGRRGHNGNVAVGSGRPLAERISRPRKRGGDDGDDQDGQDDDDEDGRTSLAVAARRGID
RYVPGSGSTAGGGGSGRLSRSHSPPPRRRDGGRRPGERRGGRNGNGRSDNNNNNNNNNNN
NNSQNGGGGGGNRRPRKTQEELDAEMADYFVEGSNGAAATTTAAPAVEAAAAAHDDGDDT
DMIL
NT seq 915 nt   +upstreamnt  +downstreamnt
atgtcaaggcgtcacgcagccgtgcatcgccagagcggtaggcccccttcttcggattct
tcttctgttccgtctctttctgtttcacgcccttggtgcgccctgtctaacgagtccagc
acccgtggcacgcgcgtccgcgtcgacaacctccactacgacctgaccaaagacgacctc
gagggcctcttttcccgcatcggccctgtcgccgccgtcgacctcgtctacgaccgcgcc
ggccgctccgagggcaccgcctacgtcacctacctcgaacacgacgacgcccgcgcggcc
ctccgcgagttcgacggcgccaacgccaagggccagcccattcgactgtcgattgtgccg
gccggcggacggcgcggccacaatggcaacgtggccgttgggagcggccggccactggcc
gagcgcatctcgcggccaagaaagcggggtggggatgacggtgacgaccaagatggccaa
gacgacgacgacgaggacggccgcacgagcctggccgtggcagcacgccgcggtattgac
cggtacgtgcccgggtcaggctcgacggccgggggcggtggtagtggccggctgtcgcgg
tcgcacagtccgccgccccgccgccgcgacggcggccggcggccgggtgagcggagaggc
ggccgtaacggtaacggccgttctgacaacaacaacaacaacaacaacaacaacaacaac
aacaacagccagaacggtggcggcggcggcggcaaccggcggccgcgcaagacacaagag
gagctggacgcagagatggccgactactttgtcgagggcagcaacggcgccgccgccacc
accaccgctgcaccggccgtcgaggccgcagcagcggcgcacgacgacggcgacgatacg
gatatgattctgtga

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