Sporothrix schenckii: SPSK_09640
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Entry
SPSK_09640 CDS
T05555
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
ssck
Sporothrix schenckii
Pathway
ssck03013
Nucleocytoplasmic transport
ssck03015
mRNA surveillance pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_09640
09122 Translation
03013 Nucleocytoplasmic transport
SPSK_09640
03015 mRNA surveillance pathway
SPSK_09640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_09640
03041 Spliceosome [BR:
ssck03041
]
SPSK_09640
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SPSK_09640
TREX complex
SPSK_09640
Spliceosome [BR:
ssck03041
]
Complex C
Other components
EJC/TREX
SPSK_09640
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SPSK_09640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRC2_EED_ins
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
27671489
NCBI-ProteinID:
XP_016588475
UniProt:
A0A0F2M9N8
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MSRRHAAVHRQSGRPPSSDSSSVPSLSVSRPWCALSNESSTRGTRVRVDNLHYDLTKDDL
EGLFSRIGPVAAVDLVYDRAGRSEGTAYVTYLEHDDARAALREFDGANAKGQPIRLSIVP
AGGRRGHNGNVAVGSGRPLAERISRPRKRGGDDGDDQDGQDDDDEDGRTSLAVAARRGID
RYVPGSGSTAGGGGSGRLSRSHSPPPRRRDGGRRPGERRGGRNGNGRSDNNNNNNNNNNN
NNSQNGGGGGGNRRPRKTQEELDAEMADYFVEGSNGAAATTTAAPAVEAAAAAHDDGDDT
DMIL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggcgtcacgcagccgtgcatcgccagagcggtaggcccccttcttcggattct
tcttctgttccgtctctttctgtttcacgcccttggtgcgccctgtctaacgagtccagc
acccgtggcacgcgcgtccgcgtcgacaacctccactacgacctgaccaaagacgacctc
gagggcctcttttcccgcatcggccctgtcgccgccgtcgacctcgtctacgaccgcgcc
ggccgctccgagggcaccgcctacgtcacctacctcgaacacgacgacgcccgcgcggcc
ctccgcgagttcgacggcgccaacgccaagggccagcccattcgactgtcgattgtgccg
gccggcggacggcgcggccacaatggcaacgtggccgttgggagcggccggccactggcc
gagcgcatctcgcggccaagaaagcggggtggggatgacggtgacgaccaagatggccaa
gacgacgacgacgaggacggccgcacgagcctggccgtggcagcacgccgcggtattgac
cggtacgtgcccgggtcaggctcgacggccgggggcggtggtagtggccggctgtcgcgg
tcgcacagtccgccgccccgccgccgcgacggcggccggcggccgggtgagcggagaggc
ggccgtaacggtaacggccgttctgacaacaacaacaacaacaacaacaacaacaacaac
aacaacagccagaacggtggcggcggcggcggcaaccggcggccgcgcaagacacaagag
gagctggacgcagagatggccgactactttgtcgagggcagcaacggcgccgccgccacc
accaccgctgcaccggccgtcgaggccgcagcagcggcgcacgacgacggcgacgatacg
gatatgattctgtga
DBGET
integrated database retrieval system