Sporothrix schenckii: SPSK_09688
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Entry
SPSK_09688 CDS
T05555
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ssck
Sporothrix schenckii
Pathway
ssck03013
Nucleocytoplasmic transport
ssck03015
mRNA surveillance pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_09688
09122 Translation
03013 Nucleocytoplasmic transport
SPSK_09688
03015 mRNA surveillance pathway
SPSK_09688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_09688
03041 Spliceosome [BR:
ssck03041
]
SPSK_09688
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
SPSK_09688
Spliceosome [BR:
ssck03041
]
Common components
Common spliceosomal components
Cap binding complex
SPSK_09688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
27671537
NCBI-ProteinID:
XP_016588528
UniProt:
A0A0F2M884
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MAPVQEQQSTVDRLDRPSAYFDAKRRRNNHRHRDDIEAEAPAEDPLANATTLYVGNLSFY
TTEEQVYELFSKCGEIKRLIMGLDRFNKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERI
IRTDLDPGFQEGRQYGRGKSGGQVRDEYRDDFDEGRGGLGRALQMERDAAQERERERERE
RRANRDREREGDRDRDRYDRGGRSNRGHDRDYRNGAGRDAAVEGDFDDFR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgtacaggaacaacagagcacggtcgaccgtctggatcggccgagcgcctac
ttcgatgcgaagagacggcggaacaaccatcgccaccgcgacgacattgaggccgaggcc
cctgcggaagaccccctcgccaatgcgacgacgctctacgtgggcaacttgtcattctat
acaaccgaagaacaagtctacgagctgttttccaagtgcggcgagatcaagcgtttgatc
atgggcctcgaccggttcaacaagaccccctgcggcttctgcttcgttgagtactacacg
caccaggacgccctcgactgcatgaagtacattggcggcacgaagctggacgagcgcatc
atccgcacagatttggacccgggcttccaggagggccggcagtacggccgcggcaagtcg
ggtggccaggtgcgcgacgagtaccgcgacgactttgacgagggccgcggcggcctgggc
cgggcgctgcagatggagcgagacgcggcacaggagcgcgaacgagagcgcgagcgcgag
cggcgtgccaaccgcgaccgtgagcgggagggcgaccgtgaccgcgaccggtatgaccgg
ggcgggcgcagcaaccggggccatgaccgcgattaccgcaacggggccggtcgcgacgca
gcggtggagggcgactttgatgacttccggtga
DBGET
integrated database retrieval system
