KEGG   Sporothrix schenckii: SPSK_10882
Entry
SPSK_10882        CDS       T05555                                 
Name
(RefSeq) WD repeat and SOF domain-containing protein 1
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
ssck  Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssck03009]
    SPSK_10882
   04121 Ubiquitin system [BR:ssck04121]
    SPSK_10882
Ribosome biogenesis [BR:ssck03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    SPSK_10882
Ubiquitin system [BR:ssck04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SPSK_10882
SSDB
Motif
Pfam: WD40 Sof1 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR19_1st MIOS_WD40 eIF2A Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT140_2nd Beta-prop_HPS5 Beta-prop_VPS8 tRNA_m1G_MT Beta-prop_NOL10_N PROPPIN Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 27672407
NCBI-ProteinID: XP_016587033
UniProt: A0A0F2M3U9
LinkDB
Position
Unknown
AA seq 438 aa
MKIKVLNRSAASSQHQQRNHDPALHPFERAREYTRALQAAKMERMFAAPFVAQIGVGHQD
GVYCLAKDLENTDRLASASADGIIKIWDLSTRDETQKAKAHEGLIKGISWIKTQAGRYLV
SCGTDRNITVMDAVSGEVTSGLGDCAFTSITSHRTTPTAVVSGSSRIFVYDLGRPTPTVS
ETLAWPHSVDTITAVRLNQVETSLLGSCGSDRSLVFYDLRTSSPIHKTVLNFACNDLAWN
PQEAFNFAVGSEDYNIYHFDMRQMSRARNIQQGHTGAVLSLDFNPTGTELVSGSWDRTIR
LFDVRSGQSRDVYHTKRMARVHAVNFTPDGNYVLSGSDEGNVRLWRAQAASRQGIKSTAE
RQKLEYDATLKERYKHMPEVRRILRHRHLPKVVKKADQINQEMLRSIKRKEENRRKHSAK
KDSKRTAARDKVVLANVE
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgaaaatcaaggtcttaaatcgatcggcggcgtcgtcgcagcaccagcagcgcaaccat
gacccggcgctgcatcccttcgaacgcgcccgcgaatacacccgtgcgctgcaggcggcc
aagatggagcgcatgttcgccgctccctttgtcgcccagatcggcgttggccaccaggac
ggcgtctactgcctcgccaaggacctcgagaacaccgaccgccttgcgtctgcgagcgcc
gacggcatcatcaagatctgggacctgtcgacacgggacgagacacagaaggccaaggcg
cacgagggcctcatcaagggcatctcgtggataaagacccaggccggccgctacctggtg
tcgtgcggcaccgaccgcaacattaccgtcatggacgccgtttcgggcgaggtcacgtcg
ggcctcggcgactgcgccttcacgtccatcacgagccaccgcaccaccccgaccgccgtt
gtttccggctcctcgcgcatctttgtctacgacctcggccgcccgacgccgactgtgtcc
gagacgctggcctggccgcactccgtcgacaccatcaccgcggtccgcctcaaccaggtc
gagaccagtctgctgggctcctgcggcagcgaccgcagcctggtgttttacgacctgcgc
acctcctcgcccattcacaagaccgtcctcaacttcgcctgcaacgacctcgcctggaac
ccgcaggaggccttcaactttgccgtcggcagcgaagactacaacatctaccactttgac
atgcgccagatgagccgcgcccgcaacatccagcagggccacaccggcgccgtcctgtcc
ctcgacttcaaccccaccggcaccgagctcgtcagcggctcctgggaccgcaccattcgc
ctctttgacgtgcgcagcggccagagccgcgacgtctaccacaccaagcgcatggcccgc
gtccacgccgtcaacttcacccccgacggcaactacgtcctgtcgggctccgacgagggc
aacgtgcgtctgtggcgcgcccaggccgcctcgcgccaaggcatcaagtccaccgccgag
cggcagaagctcgagtacgacgccactctcaaggagcgctacaagcacatgcccgaggtc
cgccgcatcctgcgccaccgccatctgcccaaggtcgtcaagaaggccgaccagatcaac
caggagatgctgcggtccatcaagcggaaggaggagaaccgccgcaagcacagcgccaag
aaggacagcaagcgcacggccgcccgcgacaaggtcgtcctggccaatgtggaatga

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