Sporothrix schenckii: SPSK_11008
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Entry
SPSK_11008 CDS
T05555
Name
(RefSeq) translation initiation factor 4A
KO
K03257
translation initiation factor 4A
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_11008
03012 Translation factors [BR:
ssck03012
]
SPSK_11008
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssck04147
]
SPSK_11008
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SPSK_11008
mRNA cycle factors
Stress granule specific factors
SPSK_11008
Translation factors [BR:
ssck03012
]
Eukaryotic type
Initiation factors
eIF-4
SPSK_11008
Exosome [BR:
ssck04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPSK_11008
Exosomal proteins of bladder cancer cells
SPSK_11008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Spore_III_AA
CMS1
AAA_19
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
27672506
NCBI-ProteinID:
XP_016588477
UniProt:
A0A0F2MCB2
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MATDKGLEDVPEGQIESNYDETVDSFDDMNLKADLLRGVYAYGFERPSAIQQRAIMPVIK
GHDVIAQAQSGTGKTATFSISVLQKIDPNIKQCQALILAPTCHACIGGTSVRDDMKALQD
GPQVVVGTPGRVHDMIQRRFLKTDAMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVV
LLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETV
TITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATD
LLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDVRMMREIEQF
YSTQIEEMPMNVADLI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgacaagggactcgaggatgttcccgagggacagatcgagtcaaactacgat
gagaccgtggactcgttcgacgacatgaacctcaaggccgacctcctgcgtggtgtctat
gcctacggtttcgagcgcccgtctgctatccagcagcgcgccatcatgcccgtcatcaag
ggccacgatgtcattgcccaggcccagtcgggtaccggcaagacggccaccttctccatc
tcggttctgcagaagatcgaccccaacatcaagcagtgccaggccctgatcctcgccccc
acctgccacgcctgcatcggcggcaccagcgtccgcgacgacatgaaggccctgcaggac
ggcccccaggtcgtcgtcggcacccccggccgcgtccacgacatgattcagcgccgcttc
ctcaagaccgacgccatgaagatgttcgtcctcgacgaggccgacgagatgctgtctcgc
ggcttcaccgagcagatctacgacatcttccagctgctgccccagtccacccaggtcgtg
ctgctgtccgccaccatgccccaggacgtcctggaggtcaccaccaagttcatgcgcgac
cccgtccgcatcctggtcaagaaggacgagctgaccctggagggtatcaagcagttctac
attgccgtcgagaaggaggagtggaagctcgacaccctctcggatctgtacgagaccgtc
accatcacccaggccgtcatcttctgcaacacccgcagaaaggtcgactggctcaccgac
aagctgaccgcccgcgacttcaccgtctcggccatgcacggcgacatggaccaggcccag
cgcgacctgatcatgaaggagttccgctcgggctcgtcccgtgtcctgattgccacggat
ctgctggcccgtggtatcgatgtccagcaggtgtcgctggtcatcaactacgatctgccc
gccaaccgtgagaactacatccaccgcatcggccgtggtggtcgtttcggtcgcaagggt
gttgccatcaactttgtcaccgccgaggacgtccgcatgatgcgcgagatcgagcagttc
tacagcacccagattgaggagatgccgatgaacgtggccgacctgatctaa
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