Scomber scombrus (Atlantic mackerel): 133976276
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Entry
133976276 CDS
T10651
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssco03021
]
133976276 (gtf3c3)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
133976276 (gtf3c3)
TFIIIC, fungi type
133976276 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_14
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_6
TPR_12
TPR_11
ANAPC3
TPR_7
TPR_9
TPR_20
PknG_TPR
TPR_Slam
TPR_10
HAT_PRP39_C
HAT_PRP39_N
Sel1
Motif
Other DBs
NCBI-GeneID:
133976276
NCBI-ProteinID:
XP_062270424
LinkDB
All DBs
Position
24:14373010..14387053
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AA seq
949 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDKRRDERKAKESCQESDVLVEDEEEEEEEDAQPSTSAQA
QGITEEGVSPGVQLAFASMLGETPDPLSSEEEEEEVEEDSLSYADDENDEDYKVEEEEEE
EKKKKQQRGKAKLDLSEKTQKGGEGEEQEAEDMTVGDVFALEMELNRENKKMMKERRNRS
KLPRALRGLMGEANIRYARGDKEDAIMMCMEIIRQAPLAYEPFSTLAMIYEDDEDMDKAL
QFGLIAAHLNPSDSEEWVRLAEMSLEQDNIRQAIVCYTKAIKYNPTNVRYLWERSSLHMR
VGEHKQCMDGYRRILALLPLEDGEHFMQLSKDMAKSYYESNDLPSALGVIEDALSRHPSL
VSDDVINMAAELYIANRQYNKALQVLVKFAGVVLVRGETKPDSTVLPKEEKVSEKTTEEE
EKNEEGAKSKTVEETAAEENGEIKDVEVPDSVPVDLKAKLIVCLVHLHVNTPLEGLVSTM
TEQSPEEIGDLYLDVGEAYLEQGEYLCALPLLSALVVSEKYNLAVVWLRHAECLKALGHM
EEAAQSFTKVVEMAPQHLEARLSLATLQQQLGRPDCALKALESMYDSDTLAQDSSAAQKE
LKLLLHRSTLLKTQGQIQHYLDAMITMISMLLKVAMQRAKVCVCSISVSGEQHLRLVKTK
DMLPEIADQEAAYLDNTGKTNVLSREDWWQLLVSCLLTLCEVERYKEAELLVESAMEFYS
FYDNKPRRKELEFFGLSATILDHNHYKAYNYIRLMLMENVDRPQLWNIFNQLTITSQHQR
HHRFCLRLLLKHPDNHALCVLCGHNAMVSGSFKHALGQYVQAFKTHPNSPLQSLCVGLTF
FHMASQKYVAKRHTLVLQGFSFLWRYLELRGECQESMYNLGRALHQMGLTHLAIHYYQKA
LTLPAQKLEGIDDDQVDLRREIAFNLSLIYQASGNLEMAHQLINTHCVI
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggttcagcgctgagctcattgactatctggagggaagaataacatttgaagag
tttgataagaggagagacgagaggaaagcgaaggagtcctgtcaggagtcagatgtgtta
gttgaagatgaggaagaggaggaggaggaggatgctcagccctccacctctgcacaggca
caggggataacagaggagggagtcagcccgggggtccagctggccttcgcctcaatgctg
ggagaaaccccagaccccctgtcttcagaggaagaggaggaggaggtagaggaggacagc
ttgagctacgcagacgatgaaaacgatgaggattacaaggtggaggaggaagaggaggag
gagaagaagaagaagcagcagcggggaaaggcaaagctggatctgtcagaaaagacacag
aagggaggagagggagaagagcaggaggctgaggacatgacggtgggagacgtgttcgcg
ctggagatggagctgaaccgagagaacaagaagatgatgaaggagcggcgtaaccgcagc
aagctgccccgggctctgagaggtctgatgggagaggccaacatccgttacgctagagga
gacaaagaggacgccatcatgatgtgtatggagatcatcagacaggctcctctggcctat
gagcctttctccacactggctatgatctatgaggatgatgaggacatggacaaagcgctg
cagttcggtctgatcgctgcccacctgaacccctcagactctgaggagtgggtcagacta
gcagaaatgtctctggagcaggacaacatccggcaggccatcgtctgctacaccaaggcc
atcaagtacaaccccaccaacgtgcgctacctgtgggagcgctccagcctccacatgcgc
gtgggcgagcacaaacagtgcatggacggctaccgcaggatcctcgcactgctgccactg
gaggatggagagcacttcatgcagctgtccaaggacatggccaagagttactatgagagt
aatgacttgccctcagcactgggtgtgatagaggatgctctgtcgcgacacccaagcctg
gtcagtgatgatgtcatcaacatggcagctgagctctatatcgccaaccgtcagtacaac
aaggccttacaggtcttggttaagtttgcaggtgtagttttggtgaggggggaaaccaaa
ccagactccacagttctgccgaaagaagagaaagtgtcagagaagacgacggaggaggag
gagaagaatgaagaaggagcaaagtcaaagactgtagaggaaacggcagcagaagaaaac
ggtgaaattaaggatgtagaggtaccagacagcgtcccagtggacctgaaggccaagctc
attgtctgcctcgtacacctgcatgtcaacactcccctggagggcctggtgtcaacaatg
acagagcagagtccagaggagatcggggacttgtacctggatgtaggtgaagcctacctg
gagcagggagagtacctgtgtgctctgcctctgctgtctgcactcgtcgtatcagagaag
tacaacctggctgtggtctggctccgacacgcagagtgtctgaaggcactgggccacatg
gaggaagcagcacaaagcttcactaaggtggtggagatggctccgcagcacctggaggcc
cggctgtccctggccaccctgcagcagcagctgggcagaccagattgcgccctgaaggcc
ctggagtccatgtacgacagtgacacactggcacaagactcatcagctgcacaaaaggag
ttaaagctgctgctgcatcgctccacactgctcaagactcagggacaaatccagcactac
ctggatgctatgatcactatgatctccatgctgctcaaggtggccatgcagcgcgctaag
gtgtgtgtgtgctctatatctgtgtcgggggagcaacacctgaggctggtgaagaccaaa
gacatgctgcctgagatcgctgaccaggaagctgcctatctggataacacaggtaagaca
aacgtcctgtccagagaggactggtggcagctgctggtgagctgcctgctcacactgtgc
gaggtggagcgctacaaagaagccgagctgctggtggagtcagccatggagttctactcc
ttctacgacaacaagcccaggaggaaggagctggagttcttcggcctgtccgcaaccatc
ctggaccacaaccactacaaggcctacaactacatcagattgatgctgatggagaatgtg
gatcgacctcagctttggaatattttcaaccagctgacgataacgtcccagcaccagcgt
caccaccgcttctgtctgcgtctgctgttaaaacatcccgacaaccacgccctgtgtgtc
ctctgtggacacaacgccatggtgtcaggaagcttcaaacacgctctgggtcagtatgtt
caggcctttaagactcaccctaacagcccgctccaaagcctgtgtgtgggtctcaccttc
ttccacatggcgtctcagaagtatgtagccaaacgtcatacactggtgctgcagggtttc
tccttcctgtggcgctatctggagctacgtggagaatgtcaggagagtatgtacaacctg
ggcagagcgctgcaccagatgggcctcacacatttggccatacattattaccagaaggct
cttacactgcccgcacagaaactggagggtatcgatgacgatcaggtggatctgaggagg
gagatcgccttcaacctctccctcatctaccaggccagcgggaacctggagatggcccac
cagctcatcaacacacactgcgtcatctga
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