Scomber scombrus (Atlantic mackerel): 133976287
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Entry
133976287 CDS
T10651
Symbol
zeb2b
Name
(RefSeq) zinc finger E-box-binding homeobox 2b isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133976287 (zeb2b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
133976287 (zeb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_6
zf-C2H2_15
zf-C2H2_2
Spectrin
Csm1_N
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
133976287
NCBI-ProteinID:
XP_062270437
LinkDB
All DBs
Position
24:complement(2154522..2239259)
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AA seq
1219 aa
AA seq
DB search
MKQEIMADGPRCKRRKQANPRRKNALNYENVVETGSETEEEDKLPVSEEDPLINGTGSPA
SLTNPEASPRAESHGLLTKEEEDDEMRDSGVEHIWPDNDMLSASVDGTDEIKDDFDTLGP
DTTLQAVGNGTVKSVDCTSEFEDFFSKRKLDDGDSHVVSIAEYLQRGDTAIIYPEAPEEL
SRLGTPEATGPEENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFAC
PLCNYTFAYRTQLERHMATHKPARDQHQLLNQAAGNRKFKCTECGKAFKYKHHLKEHLRI
HSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLIAVNGRMRSNMKTGSSPTSASSSPTN
TAITQLRQKLENGKPLGLPDHNNHLNIKTEPLDFNDYKLMMASHGFGAPGPFMNGVGGNS
PLGIHHSAQSPLQHLGIAGLEQQLLGYPGPLMNNLSEVQKVLQIVDNTVCRQKMDCKPEE
LSKLKAYMKELGSQVEEQKQGLVNAGHQMGLPLVNHNGATKSIIDYTLEKVNEAKACLQS
LTTDSKRQISNIKREKSNHMLEGGVDEKVQENSMFTPYACQYCKESFTGPIPLHQHERYL
CKMNEEIKAVLQPSENLMPSKPAIYMEKNTHLTSSMMSEKGLTGPINPYRDHMSVLKAYF
AMNMEPNSEELLKISTAVGLPQEFVREWFEQRKMYHYGTTRTPPLEHRNNMDMVVGTNNH
HTPPKDSMAARSPVSLLKPTDRITSPSIAELHNNVNNCDNSFRHLKNHQYSGNAKATGEK
LDHSRSNTPSPLNLSSTSSKNSHSSSYTPNSLTSEDLQAEPLDLSLPRLMKEPKHALTVK
SRPKVNSITIDHNSVPSPREHFEEPLNLAYLKKEFSVSHNGNLEKSTSPIFGINPFAAKP
LYTSLPPQSAFPPATFMPPMQASIPGLRHYPGMDQMGFLPHMAYTYAAGAATFAEMQQRR
KYQRKPGFQGDLLDGTPDYMSGLDDMTDPDSCLSRKKIKKTESGMYACDLCDKTFQKSSS
LLRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQH
MNHRYSYCKREAEEREAAEREAREKGHLEPTELLMSRAYLQGMTPQGYPELAEREAILRH
DAVNGGIREGRKEVEGTYAKIGRREDEFEEEEEESKSMDTDPDTLRDEEENGEHSMDDSS
LDGKTETKSDHEDTMEDGM
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagagatcatggcggatggccccaggtgtaagaggcgaaaacaagccaacccg
agacggaaaaacgctctgaactacgagaatgtggtggagacaggttcagagaccgaagag
gaagacaagctgcccgtgtccgaggaagaccccctgatcaacggcaccggcagcccggcc
agcctcaccaacccggaggcctcgccgcgcgccgagagccacggcctgctgaccaaggag
gaagaggacgacgagatgagggacagcggcgtggagcatatctggcccgacaatgacatg
ctgagtgcctctgtggatggtactgatgaaataaaagatgattttgacaccctggggcct
gataccactttgcaggcagttggaaacggtacagtcaagagcgtcgattgcacttcagag
ttcgaggacttcttctccaagcggaagctggacgacggtgacagccacgtggtgagcatc
gcagagtacctccagcggggcgacactgccatcatctacccagaagccccagaggagctg
tcccgcctgggtacaccagaggccaccgggccagaggagaacgacctgccacctggaacg
ccagatgccttcgcccaactgttgacctgcccctactgcgaccggggctacaagcgtttg
acatcgctgaaggagcacatcaagtaccgccatgagaagaacgaggagaacttcgcctgc
cccctgtgcaactacacgtttgcttaccgcactcagctcgagcggcatatggccacacac
aagcctgcgagggatcagcaccaactgctcaaccaagcggccggcaaccgcaagttcaaa
tgcaccgagtgtggcaaggccttcaaatacaagcaccatctgaaggaacacctccggatt
catagcggtgaaaaaccgtatgagtgccccaactgcaagaagcgtttctcccactcgggc
tcctacagttcccacataagcagcaaaaagtgcattggcctgattgccgtcaacggcagg
atgcgcagcaacatgaagacgggctcgtcccccacctcagcctcctcctcacccaccaac
actgccatcacccagctgcgccagaagctggagaacggcaagccgctcggcctccccgat
cacaacaaccacctgaacataaagacggagccgctcgacttcaacgactacaagctgatg
atggcatcgcatggattcggagctcctggaccgttcatgaatggagtaggagggaacagc
ccactggggattcaccactcagcccagagccccctgcagcaccttgggattgccggactt
gagcagcagctcctgggctacccgggaccgctgatgaacaacctgagcgaggtgcagaag
gtcctccagatcgtggacaacactgtgtgcaggcagaaaatggactgcaagccggaggag
ctctccaagctcaaggcctacatgaaggagctggggtcccaggttgaagagcagaaacag
gggctggtaaatgcagggcatcagatgggtcttccacttgtcaatcacaacggcgccacc
aaaagcatcatcgactacacgctagaaaaagtgaacgaagccaaagcctgcctccagagc
ttgacgacagactcaaagagacagattagcaatatcaaacgagagaaatccaaccacatg
cttgaaggaggtgtggatgagaaggtgcaggaaaacagcatgtttacaccttatgcttgc
caatattgcaaagaatccttcaccgggcccatacccttgcatcagcatgaacgctacctg
tgtaaaatgaacgaggagatcaaagccgtgctgcagcccagtgagaatctgatgcccagc
aaaccagcgatatacatggagaagaacacccacttaacctcctccatgatgtctgagaag
ggactcactgggcccatcaacccttacagggaccacatgtctgtgctgaaggcgtatttc
gccatgaacatggagcccaactcggaggagctgctcaagatctccacagcagtcggcctt
cctcaggaatttgtcagggagtggttcgagcagcgaaagatgtaccactacggcaccacc
agaactccgccgctagagcacaggaacaacatggatatggttgtcggaacaaataaccac
cacactccaccaaaagactctatggcagctaggtcacctgtgtctcttctcaaacctact
gaccgcatcacgtccccctccatagcggagctccacaacaacgttaacaactgtgacaac
tcattcagacatttgaaaaaccaccagtatagcggcaacgccaaagccacgggtgaaaag
ttggaccactcccgcagcaacaccccctccccgttaaatctgtcctccacatcttccaaa
aactctcacagcagctcctacactccaaacagcttgacttcagaagacctgcaggctgag
ccgctggacctctctctgccgagactcatgaaggaacccaagcatgcactgactgtcaaa
agcagacctaaagtcaacagtattaccatcgaccacaacagcgtcccctctccccgcgag
cacttcgaggagcctttgaacttagcctatctcaagaaggagttctcagtctctcacaat
ggaaaccttgaaaaaagcactagccccatcttcggcattaacccgtttgctgccaaaccc
ctgtatacatcacttccacctcagagcgctttcccacctgccacattcatgcccccgatg
caggccagcataccaggtcttaggcactacccgggcatggatcaaatgggcttcctacca
cacatggcctacacttacgcagcaggggcagctacctttgccgagatgcagcagaggaga
aagtaccagcggaaaccaggtttccagggggacctgctcgacggtacaccagattacatg
tcagggctggacgacatgacagaccccgactcctgtctgtcgcggaagaagattaagaag
accgaaagtggtatgtacgcgtgtgacttgtgcgacaaaacattccagaagagcagttcc
cttctaagacacaaatatgaacacacaggcaagaggccgcaccagtgccagatctgcaag
aaagccttcaaacacaaacaccatctcatcgagcactccagactgcactcgggggagaag
ccttaccagtgcgacaagtgcgggaagagattctcccactcgggctcctactcgcagcac
atgaaccaccgctactcctactgcaagcgggaggccgaggagcgggaggcggctgagagg
gaggcccgtgagaagggccacctggagcccacagagctgctgatgagccgggcatacttg
cagggcatgactcctcagggttacccggagctggccgagcgcgaggccatcctgaggcac
gacgccgtgaacggagggatcagagagggacggaaggaagtggaaggaacgtatgcgaag
attggacgcagggaggacgagttcgaggaggaggaggaggagagcaagagcatggacacg
gacccggacacgttgagggacgaggaggagaacggagagcactcgatggacgatagctcg
ctggacggcaaaacggaaaccaaatcggatcacgaggacacgatggaggatggcatgtaa
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integrated database retrieval system
