Scomber scombrus (Atlantic mackerel): 133976290
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Entry
133976290 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133976290
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133976290
NCBI-ProteinID:
XP_062270444
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Position
24:complement(965980..972374)
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AA seq
1120 aa
AA seq
DB search
MDQSEDREEGVPPSKRSRCGEHDSQTKAQRRTRRQHRPDSAEPEPEPSCVSMKSDWSMDH
PFNFKDGRHSDDHRRKLDQPEPSCVSMKSDQSKGHPLIFKGGHDSDDRRVDQESSEDPSG
QSAQQHQTHLDSTFMLLEKNIVTFVKNELKKMQKLLSPNYPECLESQREDEEVLDGEEEE
QRRSSRDAFLKITLHFLRRMKQEELADCLQSRTPAGCQSKLKSNLQKKFQCVFEGIAKAG
NPTLLNQIYTPLYITEGGTAEVNDEHEIRQIETASRKPVRPETTITHEDIFKASPGRDEP
IRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVH
HFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRG
KLLPSARLWITTRPAAANQIPPECVSMVTEIRGFNDPQKEEYFSKRFRDKKQASTIISHI
ETSRSLHIMCHIPVFCWITATVLEDVLKSRERGELPKTLTEMYIHFLVLQSKLKNIKYDG
GAETDPHWSPENRKMIESLGKLAFEHLQKGNLIFYESDLTECGIDIRAASVCSGVFTQVF
KEERGLYQDKVFCFVHLSVQEFLAALHVHLTFKSGVNLLAEEQTTSLKSESKQESAETRF
YQSALDEALKSPNGHLDLFLRFLLGLSLQTNQSLLRGLLTQTGCCSQTNQDTVKYIKKKI
SENLSAERSINLFHCLNELKDRSLVEEIQQYLRSGRLSTEKLSPAQWSALGFILLSSEKY
LDVFDLKKYSASDEALLRLLPVVKVSNKAVLSGCNLSERSCAALSSVLSSQSSSLRDLDL
SNNNLQDSGVKQLSAGLESPHCTLKTLSLSGCLITEEGCASLASALRSNPSHLRELDLSY
NHPGDSGEKILSAGLDTLSLQPAGERWLTPGLRKYSCELTLDPNTAHRKLKLSDNNRKVT
YMKEDQSYPDHPDRFDHWPQLLCSNELTGRCYWEVEWIGNVHIALSYRGIGRKGDRADCA
FGPNDQSWCLDCSDDYGCSVRHRTSSTSISDSSSSVSHRVAVYVDCPAGTLSFYRVSSDT
LIHLHTFNTTFTEPLYVGFGFRFGWSDSSFLLSEKPSSVI
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagtgaggacagagaggagggagtccctccctctaaacgctctcggtgtggg
gaacatgacagccagaccaaagctcagagaagaacaaggaggcagcacagaccagactct
gctgaacctgaacctgaacccagctgtgtgtctatgaagagtgattggtctatggatcat
ccttttaacttcaaagatggacgccactctgatgatcacaggaggaagctggaccaacct
gaacccagctgtgtgtctatgaagagcgatcagtctaagggtcatcctttgatcttcaaa
ggtggacacgactctgatgatcgcagagtggaccaggagagctcagaggatcccagtggt
cagtctgcccagcagcatcaaacacacctggactccacatttatgctgctggagaagaac
atcgtcacttttgtgaagaacgagctgaagaagatgcagaagcttctgagtccaaattac
ccagaatgcttagagagtcagagggaggatgaggaggtgttggacggtgaggaggaagag
cagaggaggagcagcagagatgcatttctgaagatcacactgcacttcctgaggagaatg
aagcaggaggagctggctgactgtctgcagagcagaactcctgcaggttgtcagtctaaa
ctcaagtctaacctgcagaagaagttccagtgtgtgtttgaggggattgctaaagcagga
aacccaacccttctgaatcagatctacacaccgctctacatcacagagggagggactgca
gaggtcaatgatgaacatgagatcagacagattgaaacagcatccaggaaaccagtcaga
ccagaaacaacaatcacacatgaagacatctttaaagcctcacctggaagagatgaacca
atcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaag
ttcactctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattc
actttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcat
cacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtg
ttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacaatgagatc
ctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcaggggg
aaacttcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatc
cctcctgagtgtgtcagcatggtgacagagatcagagggttcaatgacccacagaaggag
gagtacttcagtaagagattcagagataagaagcaggccagcaccatcatctcccacatc
gagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctggaggatgtgttgaaaagcagagagagaggagagctgcccaagaccctgact
gagatgtacatccacttcctggtgcttcagtccaaactgaagaacatcaagtatgatgga
ggagctgagacagatccacactggagtccagagaacaggaagatgattgagtctctggga
aaactggcttttgagcatcttcagaaaggcaacctgatcttctatgaatcagacctgaca
gagtgtggcatcgatatcagagcagcctcagtgtgctcaggagtgttcacacaggtcttt
aaagaggagagagggctataccaggacaaggtgttctgctttgtccatctgagtgttcag
gagtttctggctgctcttcatgtccatctgacattcaagtctggagtcaatctgctggca
gaagaacaaacaacatccctgaaatctgaaagtaaacaagaatctgcagagacacgtttc
taccagagtgctttggatgaggccttaaagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggtctttcactgcagaccaatcagagtctcctacgaggtctgctgaca
cagacaggatgttgctcacagaccaatcaggatacagtcaagtacatcaagaagaagatc
agtgagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaag
gatcgttctctagtggaggagatccaacagtacctgagatcaggaagactctccacagag
aaattgtctcctgctcagtggtcagctctgggcttcatcttattgtcatcagaaaaatat
ctggacgtgtttgacctgaagaaatactctgcttcagatgaggctcttctgaggctgctg
ccagtggtcaaagtctccaacaaagctgtgctgagtggctgtaacctctcagagagaagc
tgtgcagctctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctg
agtaacaacaatctgcaggattcaggagtgaagcagctttctgctggactggagagtcca
cactgtacactgaaaactctcagcctgtcaggatgtctgatcacagaggaaggctgtgct
tctctggcctcagctctgcgctccaacccctcccatctgagagagctggacctgagctac
aatcatccaggagactcaggagagaagatcctgtctgctggactggacactctcagcctg
cagcctgctggagaacgatggttgacaccaggtctgaggaagtattcctgtgaactcaca
ctggatccaaacacagcacacagaaaactcaaactgtctgacaacaacaggaaggtgaca
tatatgaaggaggatcagtcatatcctgatcatccagacagatttgatcactggcctcag
ctgctgtgtagtaatgaactgactggtcgctgttactgggaggtcgaatggataggaaat
gttcacatagcattgagttacagaggaatcggcaggaaaggagaccgtgctgactgcgcg
tttggaccgaatgatcagtcctggtgtctggactgctctgatgattatggttgctctgtc
cgtcacagaaccagttcaacatccatctcagactcctcctcctctgtctctcacagagta
gcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctctgacaca
ctgatccacctccacaccttcaacactacattcactgagcctctgtatgttgggtttggg
ttcaggtttggttggtctgactcctcattcctcctgtcagagaaaccttctagtgttatt
tag
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integrated database retrieval system
