KEGG   Scomber scombrus (Atlantic mackerel): 133976302
Entry
133976302         CDS       T10651                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145  Phagosome
ssco04210  Apoptosis
ssco04517  IgSF CAM signaling
ssco04530  Tight junction
ssco04540  Gap junction
ssco04814  Motor proteins
ssco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    133976302
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    133976302
  09143 Cell growth and death
   04210 Apoptosis
    133976302
  09144 Cellular community - eukaryotes
   04530 Tight junction
    133976302
   04540 Gap junction
    133976302
  09142 Cell motility
   04814 Motor proteins
    133976302
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133976302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssco03019]
    133976302
   03036 Chromosome and associated proteins [BR:ssco03036]
    133976302
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssco04812]
    133976302
   04147 Exosome [BR:ssco04147]
    133976302
Messenger RNA biogenesis [BR:ssco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133976302
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     133976302
Cytoskeleton proteins [BR:ssco04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    133976302
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133976302
  Exosomal proteins of other body fluids (saliva and urine)
   133976302
  Exosomal proteins of colorectal cancer cells
   133976302
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 133976302
NCBI-ProteinID: XP_062270467
LinkDB
Position
24:complement(1752905..1756224)
AA seq 452 aa
MFPRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGSDSFNTFFIETGA
GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLV
LDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLQFAVYPAPQVS
TAVVEPYNSILTTHTTLEHADCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSV
TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEP
ANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAITTIKTKRTIQFVDWCPTGFKVGINYQ
PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEF
SEAREDMAALEKDYEEVGTDSLGDEEDEGEEY
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtttcctcgtgagtgtatttccatccatgtcggccaagccggagtccagatgggcaat
gcctgctgggagctgtactgcctggagcatggtatccagccggacggtcagatgcccagt
gacaagaccatcggaggtggatcggactccttcaacaccttcttcattgagactggagct
ggcaagcatgttcccagagccgtctttgtggacttggagccaactgtcatcgatgaagtg
cgtacaggaacctaccgtcagctcttccaccctgagcagctgatcaccggaaaggaagat
gctgccaacaactacgccagaggtcactacacagtcggcaaggagatcatcgacctggtt
cttgacaggacccgtaaactggctgaccagtgcacagggctccagggtttcctcatcttc
cactccttcggaggaggtaccggctccggcttcacctccctgctgatggagcgtctctct
gtcgactacggcaagaagtccaagctacagtttgcagtttacccagctccccaggtgtcc
acagcagtggtggagccctacaactccatcttgaccacccacaccactctagagcacgct
gactgcgccttcatggttgacaacgaggccatctacgacatctgccgcaggaacctggac
atcgagcgtcccagctacaccaacctgaacaggctgattggacagatcgtctcctccgtc
accgcctcacttcgcttcgacggcgccttgaatgtggacctgacagagttccagaccaac
ttggtgccctaccctcgtatccacttccctctggccacctacgcccccgtcatctcagca
gagaaggcttatcatgagcagttgtctgtcgctgacatcacaaacgcctgcttcgagccc
gccaaccagatggtgaagtgcgacccccgtcacggcaagtacatggcttgctgcctgctg
taccgtggtgatgtggtgcccaaagacgtcaactctgccatcacgaccatcaaaacaaag
cgcaccatccagtttgtggactggtgtcccacaggtttcaaggttggcatcaactaccag
cctcccactgtggttcctggaggagacctggccaaggtacagagggctgtgtgcatgctg
agcaacaccaccgccatcgctgaggcctgggctcgtctcgaccacaagtttgacctgatg
tacgccaagagggccttcgtccactggtatgtaggagagggcatggaggagggagagttc
tctgaggccagagaggacatggctgccctggagaaggattatgaagaggttggcaccgac
agccttggagatgaggaggatgaaggcgaggagtattaa

DBGET integrated database retrieval system