KEGG   Scomber scombrus (Atlantic mackerel): 133976303
Entry
133976303         CDS       T10651                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145  Phagosome
ssco04210  Apoptosis
ssco04517  IgSF CAM signaling
ssco04530  Tight junction
ssco04540  Gap junction
ssco04814  Motor proteins
ssco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    133976303
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    133976303
  09143 Cell growth and death
   04210 Apoptosis
    133976303
  09144 Cellular community - eukaryotes
   04530 Tight junction
    133976303
   04540 Gap junction
    133976303
  09142 Cell motility
   04814 Motor proteins
    133976303
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133976303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssco03019]
    133976303
   03036 Chromosome and associated proteins [BR:ssco03036]
    133976303
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssco04812]
    133976303
   04147 Exosome [BR:ssco04147]
    133976303
Messenger RNA biogenesis [BR:ssco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133976303
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     133976303
Cytoskeleton proteins [BR:ssco04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    133976303
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133976303
  Exosomal proteins of other body fluids (saliva and urine)
   133976303
  Exosomal proteins of colorectal cancer cells
   133976303
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 133976303
NCBI-ProteinID: XP_062270468
LinkDB
Position
24:complement(1486427..1489608)
AA seq 449 aa
MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttctatgcatgtcggccaagccggagcccagatgggaaatgcctgc
tgggagctgtactgcctggagcatggtatccagccggacggtcagatgcccagtgacaag
acctgcggaggtggagacgactccttcaacaccttcttcagtgagactggtgctggcaag
catgttcccagagctgtctttgtggacttggagccaactgtcatcgatgaagtgcgtaca
ggaacttaccgtcagctcttccaccctgagcagctgatcaccggaaaggaagatgctgcc
aacaactacgccagaggtcactacacagtcggcaaggagatcatcgacctggttcttgac
aggacccgtaaactggctgaccagtgcacagggctccagggtttcctcatcttccactcc
ttcggaggaggtaccggctccggcttcacctccctgctgatggagcgtctctctgtcgac
tatggcaagaagtccaagctggagtttgcagtttacccagctccccaggtgtccacagca
gtggtggagccctacaactccatcctgaccacccacaccactctggagcactctgactgc
gccttcatggttgacaacgaggccatctacgacatctgccgcagaaacctagacattgaa
cgtcccacctacaccaacctgaacaggctgattggtcagattgtctcctccatcaccgcc
tcccttcgcttcgatggcgccttgaacgtggacctgacagagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacctacgcccccgtcatctcagcagagaag
gcttatcatgagcagctgtctgtcgctgacatcacaaacgcctgcttcgagcccgccaac
cagatggtgaagtgcgacccccgtcacggcaagtacatggcttgctgcctgctgtaccgt
ggtgatgtggtgcccaaagacgtcaactctgccatcgctaccatcaaaacaaagcgcacc
atccagtttgtggactggtgtcccacaggtttcaaggttggcatcaactaccagcctccc
actgtggttcctggaggagacctggccaaggtacagagggctgtgtgcatgctgagcaac
accaccgccatcgctgaggcctgggctcgtctcgaccacaagtttgacctgatgtacgcc
aagagggccttcgtccactggtacgtaggagagggcatggaggagggagagttctcagag
gccagagaggacatggctgccctggagaaggattatgaagaggtgggcaccgacagcgtt
ggagaggaggatgaaggcgaggagtattaa

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