Scomber scombrus (Atlantic mackerel): 133976304
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Entry
133976304 CDS
T10651
Name
(RefSeq) tubulin alpha-1A chain-like isoform X1
KO
K07374
tubulin alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04210
Apoptosis
ssco04517
IgSF CAM signaling
ssco04530
Tight junction
ssco04540
Gap junction
ssco04814
Motor proteins
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133976304
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133976304
09143 Cell growth and death
04210 Apoptosis
133976304
09144 Cellular community - eukaryotes
04530 Tight junction
133976304
04540 Gap junction
133976304
09142 Cell motility
04814 Motor proteins
133976304
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133976304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133976304
03036 Chromosome and associated proteins [BR:
ssco03036
]
133976304
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133976304
04147 Exosome [BR:
ssco04147
]
133976304
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133976304
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133976304
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133976304
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133976304
Exosomal proteins of other body fluids (saliva and urine)
133976304
Exosomal proteins of colorectal cancer cells
133976304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
133976304
NCBI-ProteinID:
XP_062270469
LinkDB
All DBs
Position
24:complement(1494720..1496238)
Genome browser
AA seq
433 aa
AA seq
DB search
MGNACWELYCLEHGIQPDGQMPSDKTIGGGEDSFNTFFSETGAGKHVPRAVFVDLEPTVI
DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRTRKLADQCTGLQGF
LIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL
EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEF
QTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMAC
CLLYRGDVVPKEVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV
CMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEV
GTDSIGDEGEEEY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgcctgctgggagctgtactgtctggagcacggcatccagccggacggtcag
atgcccagcgacaagaccatcggaggtggagaagactcctttaataccttcttcagtgag
actggagctggcaaacatgttcccagagccgtctttgtggatttagagccaacagtcatt
gatgaggttcgcacaggaacctaccgccagctctttcaccctgagcagctgatcactgga
aaggaagatgccgccaacaactacgccagaggtcactacaccattggcaaggagataatt
gacctggttcttgacaggacccgtaaactggctgaccagtgcacagggctccagggtttc
ctcatcttccactccttcggaggaggtaccggctccggcttcacctccctgctgatggag
cgtctctctgttgactacggcaagaagtccaagctggagtttgcagtttacccagctccc
caggtgtccacagcagtggtggagccctacaactccatcctgaccacccacaccactctg
gagcactctgactgcgccttcatggttgacaacgaggccatttacgacatctgccgcaga
aacctagacattgaacgtcccacctacaccaatctcaacaggctgattggacaaattgtc
tcctccatcactgcctccctgcgctttgacggagccttgaatgtggacctgacagaattc
cagaccaacctggtgccctaccctcgtatccacttccctctggtaacctacgcccccgtc
atctcagcagagaaggcctatcatgagcagctgtctgtagcagaaataaccaatgcctgc
ttcgaaccagccaatcagatggttaaatgtgatcctcgccatggcaagtacatggcctgc
tgcctgctgtaccgtggtgatgtggtgccaaaagaggtcaattctgccatcgctaccatc
aaaacaaagcgcaccatccagtttgtggactggtgtcccacaggattcaaggtgggcatc
aactaccagcctcccactgtggttcctggaggagacctggccaaggtacagagggctgtg
tgcatgctgagtaataccactgctgttgctgaggcctgggctcgactcgaccacaagttt
gacctgatgtacgccaagagggcctttgtccactggtatgtaggagagggcatggaggag
ggagagttctcagaggccagagaagacatggctgccctggagaaggattatgaagaggtg
ggaactgacagcatcggggatgaaggcgaggaagagtactga
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