Scomber scombrus (Atlantic mackerel): 133976391
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Entry
133976391 CDS
T10651
Symbol
ptprt
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase T
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133976391 (ptprt)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
133976391 (ptprt)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
133976391 (ptprt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Y_phosphatase3
TM_ErbB1
Pur_ac_phosph_N
Ig_2
ig
Ig_3
I-set
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
133976391
NCBI-ProteinID:
XP_062270577
LinkDB
All DBs
Position
3:complement(31810336..32232804)
Genome browser
AA seq
1510 aa
AA seq
DB search
MDKRSYSLVLPAVFIYFVLLGFTVGQFFPGGCTFEDSYSSCGYSVSLGTNGFTWEQVNSW
EKPTMDPALPTGSFMVVNASGRASGQKAHLYMPTLKENDTHCIDFLYSLSSRDGASPGTL
NVYIKVNGGAQGNPVWNASDTVTEGWVKAELAISTFWPNSYQVIFEAVSVQGHPGFIAID
DIRVLAHPCRKAPHFLRLQNVEVNVGQNATFQCTAGGKWSQHDKLWLQQWNGKDTALMVT
RVVNHRRFSATVSVGDTSQRSTSRYRCVIRSDGGSGVSNYADLIVKAPPTPIAPPELLAV
GATYLWIKPNANSIIGDGPIILKEVEYRTTSGNWAETHVVDAPTYKLWHLDPDVEYEIKV
LLSRPGEGGTGPPGPPLVTRTKCADPVHGPQSVNVVDVRARQLTIQWETFGYAVTRCHSY
NLTVQYQYVFNQQEFAAEELIQTSSHYTLRGLRPFVTVRLRLVLANPEGSKESEEIVKQT
EEDVPGSVPMESLQNTPYEEKIFMQWKAPNETNGVITLYEITYKALSSLDPSADLTTQRG
RVFKLRNETHHLFVGLYPGTTYFFTLKASTNKGFGPPVTTRITTKIAAPMMPEYESEAPL
NETETTITILLKPAQSRGAPISSYQLVVKEERKSKTRRAASEAPECFSAPVSFRNASILD
SSYYIAAELPPSSLTVVQPFTVGDNKSYGGFWNPPLSPAKSYSIYYQAMSRANGETKINC
VRLANKVVIGRGQITTPYILVIPSEGASTQDSDAMEPEKQVDSTVKMAGVIAGILMFIII
LLGVVLTFKRREIHTWRTLSVGKLAKKQKETASSSTQQREMGPVTTADKSTTKVSTLHKD
DPFSTSNQDLNGFTSPSPCSFSVQGSKTLQSKSLLNSYYSVSKEPVPATTSIDSSQPSLA
QPSLTLQSFPYGGCESVELSYQSGQFQAGQFQPAIRVADLLQHITQMKCGQGYGFKEEYE
ALAEGQTAPWETAKKDENRNKNRYGNIIAYPTDDHTRVRLQLLDGDPHSDYINANYIDGY
HRPRHYIATQGPMQETVRDFWRMVWQENSASIVMVTNLVEVGRVKCVRYWPDETEVYGDI
KVTLIETEPLAEYVIRTFTVQKKGHHEIRELRQFHFTSWPDHGVPCYATGLLGFIRQVKF
LNPPDAGPIVAHCSAGAGRTGCFIAVDIMLDMAENEGVVDIFNCIRELRSQRVNMVQTEE
QYVFVHDAILEACLCGNTAIPVCEFRAIYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRP
EDCSVGLLPRNHDKNRSMDVLSADRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQH
PLPNTMGDFWRLVFDYNCSSIVMLNEMDAAQLCMQYWPEKSSCCYGPIQVEFISADIDED
IINRIFRICNMARPQDGYRLVQHFQFIGWPAYRDTPLSKRSILQLVRRLAKWQEQYDGGD
GRTVVHCLTGGGRSGTFCAICSINEMIQQQNIVDVFHTVKTLRNNKTNMVETMEQYKFCY
EVALEALSSF
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggataaacggagttattctctcgttttgcctgcagttttcatctactttgtacttttg
ggatttactgttggacaattctttccaggtggctgcacattcgaggactcctacagcagc
tgtggttacagcgtttcactgggaaccaatggatttacctgggaacaagtcaactcctgg
gagaaacccaccatggaccccgccctgcctacaggttccttcatggtggtgaacgcctca
ggaagggcgtcagggcagaaggctcacctgtacatgcccaccctgaaggagaacgacacc
cactgcatcgacttcctctactctctctccagtcgagacggagccagcccgggcacactc
aacgtctatatcaaggtgaacggaggcgctcagggaaacccggtgtggaacgcctctgat
actgttactgaaggatgggtgaaggctgagctggccatttccactttctggcccaactcc
tatcaggtaatattcgaagcagtttcagtacaaggccatccaggtttcatcgccattgat
gacataagagttctagctcacccctgccgtaaagcgcctcacttcctgcgtctgcagaat
gtggaggtgaacgtgggtcagaacgctacgtttcagtgtaccgccggagggaaatggtcc
cagcatgataaactctggctacagcagtggaacggtaaagacacagcactgatggtgacc
agggtcgtgaaccacagacgcttctctgccaccgtcagcgtcggcgacacatcgcagcgc
agcaccagccgctaccgctgcgtcatccgatcggacggagggtcgggggtgtccaactac
gccgacctcatcgttaaagctcctcccactcccatcgctccgcccgagctcctcgctgtc
ggtgccacctacctctggatcaaacccaacgccaacagcatcataggggacgggcccatc
atcctgaaggaggtcgagtaccgcaccacttcagggaactgggcagagacccacgtggtc
gacgcccccacctataaactttggcatctggatccagatgtggagtacgagattaaagtc
ctgctgtccagacccggagagggaggaacggggcctccggggccgccgctggtcaccagg
accaaatgtgcagatccagtccacggcccccaaagcgtcaacgtggtggacgtccgagcc
cggcagctgactatacaatgggagacattcggctacgctgtgacacgttgtcatagctac
aatctgacggtccagtatcagtatgtgttcaaccagcaggagtttgcagcagaggagttg
atccagacctcgtcacattatactctacgggggctgaggcccttcgtcacggtcaggctg
cggctggttctcgccaaccccgagggcagcaaggagagtgaggagatagtcaaacagacg
gaggaggatgtacctggatcagtgccaatggagtctctgcagaatacaccctacgaggaa
aagatcttcatgcagtggaaagctcccaatgagaccaatggtgtcatcacgctgtacgag
attacctacaaggccctgagctcgttagaccccagcgctgatttgacgacccagagagga
agggtgttcaagctgcggaatgagacccatcacctgttcgtaggcctctacccggggacc
acctacttcttcaccctcaaagcctccacgaacaagggcttcggtccgcccgtcaccacc
cgcatcaccaccaagatagcagctcccatgatgccagagtacgagtctgaggctccactc
aacgagacggagacgaccatcaccatcctgctgaagcctgctcagtcacgtggagcaccc
atcagctcctaccagctcgttgtgaaagaggagcgtaagtctaagacccgccgtgcagcc
tccgaggcccccgagtgtttctctgctcccgtcagcttccgcaacgcctccatcttggac
tcgtcctactacatcgctgccgagctgccgccgtccagcctcacggtcgtgcagccgttc
acggtcggagacaacaagagctacggtggtttctggaaccctccgctgtcaccggccaag
agctacagcatctactaccaggccatgagcagagccaatggggaaaccaaaatcaactgt
gtccgcctggctaacaaagtggtaataggtaggggacaaataacaacgccgtacattcta
gtcatcccaagcgaaggtgcatccacccaggactcagacgccatggagcctgagaagcag
gtggacagcacagtgaaaatggccggagtgatcgcaggaatcctcatgttcatcatcatc
ctcctcggtgtcgtcctcaccttcaaacgcagagagattcacacatggagaactctgagc
gtggggaagttggcaaagaagcagaaggagacggccagcagctccacccagcagagagag
atgggtccggtcaccaccgctgataagagcaccaccaaagtgagcaccctgcacaaggac
gaccccttctccacctccaaccaggacctcaacggattcacctccccgtctccctgttcc
ttctcggtgcaaggaagcaagacgctgcagagcaaatccctgctgaattcctactactca
gtgtccaaagagccagttccagccacaacttctatagatagtagccagccatcgctcgcc
cagccctctctgaccctgcagagttttccctatggaggctgtgagtccgtggagctctcc
tatcagagtggtcagttccaggcaggccagtttcagccggctatccgagttgccgacctc
ctccaacacatcacccagatgaaatgtggacagggctacggcttcaaggaggagtatgag
gccttagcggagggacagacggcaccctgggaaacggccaagaaggacgagaatcgtaac
aagaatcgctatggcaacatcatcgcttaccccacagacgatcacaccagagtccgactg
caactgctggacggagacccccactccgactacatcaacgccaattatatcgatggttat
catagacccagacattacatcgccacacaagggcccatgcaggagacggtgagggatttc
tggaggatggtctggcaggaaaactcagcctctatcgtcatggttaccaacctggtggag
gtgggcagggtgaaatgtgtgcgttactggcccgatgagacagaagtgtacggagacatc
aaagtgaccctgatagaaactgaaccgctggctgaatacgtcatacggacattcacagtc
caaaagaagggtcatcatgagatccgtgaactccgtcagtttcacttcaccagctggcct
gaccacggcgttccctgctacgccaccggactgctgggcttcatacgacaggtcaagttc
ctcaacccgcctgatgccgggcctatagtggcacactgcagtgctggtgcagggaggacg
ggctgtttcattgcagtggacatcatgttggacatggcggagaacgaaggcgtggtggac
attttcaactgcatccgagagctgagatcacaacgagtcaacatggttcagacagaggag
cagtatgtgtttgttcacgatgccatcttggaggcatgtctatgtgggaacacagccata
ccagtgtgtgagttcagagccatttactacaacatcagcagactggacccacagaccaac
tccagccagattaaagacgagttccagactctgaacatagtgacccctagagtccgtcca
gaagactgcagcgtgggtttgctacccaggaaccacgacaagaaccgtagtatggacgtt
ctatcagcggaccggtgcctgcctttccttatatctgtggacggagagagctcaaattac
atcaatgctgcattaatggatagccacaaacagccagcggccttcatcgttacccagcat
cctttgccaaacaccatgggcgacttctggaggctggtgtttgactacaactgctcttcc
attgtaatgcttaatgagatggatgcagcgcagttatgtatgcagtactggccggagaag
agttcgtgttgctatggtcccattcaagtcgaattcatctcagccgacatcgatgaagac
atcatcaaccgcatctttaggatctgcaacatggccaggccacaagacggttatcgcctg
gtgcagcacttccagttcatcggctggccggcctacagggacacgcctctctccaagcgc
tccatcctccagctggtcaggaggctggcgaagtggcaggagcagtatgacggaggagac
gggaggactgttgtacactgccttaccggcggagggcgttcaggaacgttctgtgccatc
tgcagcatcaatgagatgatccagcagcagaacatcgtggatgttttccacaccgtcaaa
acgctgagaaacaacaagactaacatggtggagactatggaacagtacaagttctgctat
gaagtggctcttgaggctctcagctccttctga
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integrated database retrieval system
