Scomber scombrus (Atlantic mackerel): 133976421
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Entry
133976421 CDS
T10651
Symbol
cldn10a
Name
(RefSeq) claudin-10a isoform X1
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecule (CAM) interaction
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133976421 (cldn10a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133976421 (cldn10a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133976421 (cldn10a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133976421 (cldn10a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133976421 (cldn10a)
04147 Exosome [BR:
ssco04147
]
133976421 (cldn10a)
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133976421 (cldn10a)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133976421 (cldn10a)
Exosomal proteins of colorectal cancer cells
133976421 (cldn10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
133976421
NCBI-ProteinID:
XP_062270614
LinkDB
All DBs
Position
24:13052789..13056612
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AA seq
234 aa
AA seq
DB search
MGNMATEIVAFILTVSGWILVSSTLPTDYWKVSSVDGTVITTATFWSNLWKTCVTDSTGV
SNCKDFPSMLALDAYIQVCRGLMIAAVCLGFFGAIFALIGMKCTKIGGSETTKARLTVLS
GFHFILSGFCCLTACSIYAHRITTEFFDPLFVAQKFELGAALFIGWAGSVLCILGGLIFC
FSLSEGFSMRRVAEYSYSGAASFVTRRNKHGKTANSLQKEPREPSKQFGRNAYV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacatggcaacggagatcgttgcctttatcctgaccgtctcgggctggatcctg
gtgtcgtctaccctgccgacagactactggaaggtgtcttctgtggacgggacggtcatc
accacagctaccttctggtccaacctgtggaaaacctgcgtgactgattccaccggtgtg
tccaactgcaaggactttccttcgatgctggctctggatgcctacattcaggtgtgtcgg
ggtctgatgatcgccgctgtgtgtctgggtttctttggtgcgatcttcgctttgatagga
atgaagtgcacaaaaataggaggctcagagaccaccaaagctcgtctgaccgtcctctcg
ggcttccacttcattctcagtggcttctgctgtttgactgcatgctccatatatgctcac
aggatcacaactgagttctttgaccccctctttgttgctcagaagtttgagttgggagca
gctctcttcatcggctgggctgggtctgtgctgtgtatcttaggaggacttatcttctgt
ttctccctgtctgagggcttcagtatgaggcgagtcgctgaatactcctacagtggagct
gcatcatttgtgacaaggcgcaacaagcacggcaagacagccaacagcctccaaaaagaa
ccacgggagccttcaaagcagtttggaagaaatgcctacgtgtga
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