Scomber scombrus (Atlantic mackerel): 133976434
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Entry
133976434 CDS
T10651
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04136
Autophagy - other
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133976434 (atg13)
04136 Autophagy - other
133976434 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133976434 (atg13)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133976434 (atg13)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133976434 (atg13)
Atg1 complex
133976434 (atg13)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133976434 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
133976434
NCBI-ProteinID:
XP_062270629
LinkDB
All DBs
Position
24:complement(7985642..7992856)
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AA seq
510 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQSVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPGSSQRPANMGQPCNYRAPDDD
EGGPFAGVQDSQEVCTTSFSTSPPSQLYASRLCYQPPALVGAAEFCHTNPNQLLHAGKEG
GVVLVPAQPPHGADAHLTVDHIPNTPGSSGEDDGLSQSGDGRSDGRREEGRRSASPSDPV
ESLNAFTRKVGAFVNKTNTQLTAASLDLPFAAFAPRGLDSEESDPMVQPPDSPPCPSPLQ
ASLHSQGSEGSGQQDDFVMVDFRPAFSKDDLLPMDLGTFYREFQNPPQLASLSLHISSQS
MAEDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctgagtccccaggataaaaaagacttggacaagttcattaagttcttt
gccttaaagactgtccaggtgatagtccaagctcgtcttggagagaagatctgcactcgc
tcctcgtcatcacctactggctctgactggtttaatttggccatcaaagacatcccagag
gtgactcatgaagccaagaaggcattggctggccagcttcctggcatcgggcgctcaatg
tgtgtcgagatctccctgaagacgtcagagggtgactctatggagttagagacttggtgt
ctggagatgaatgaaaagtgtgataaggacatcaaggtgtcatatacagtctataatcgt
ctgtctgtccttctgaagtctctgctggccatcaccagagtaacacctgcctataaactg
tccagaaagcagggtcatgactatgtcattttatacaggatctactttggggaagtccag
ctgagtggattaggagaaggttttcagtcagtgcgcgttggtgtcgtcggcactcctgtt
ggcacagtcacactttcatgtgcctaccgcaccaacctggcattcatgtctaacagacag
tttgagcggtcagctcctatcatggggatcattgtagatcactttgtggatcctcccggc
agcagccagcgtcctgcaaacatgggacagccctgcaactacagagctccagatgatgac
gagggaggaccgtttgcaggagttcaggattcacaggaggtctgcaccacctccttctcc
acatcccctccctctcagctttatgcttccaggttatgctaccagcctcccgctcttgta
ggagctgcagagttttgtcacactaatccaaaccagctattacatgcggggaaggagggc
ggggttgtgttggttcctgcccagcctcctcatggagctgatgcccatctgactgtagac
cacatccccaacacacctggaagcagtggcgaagacgacggcctgtcgcagagtggagat
ggaaggagcgatggtcggagggaggaaggaaggaggagcgcctccccctctgaccctgta
gaatctctcaatgcattcacgaggaaagtgggagcctttgtcaacaaaaccaacacacag
ctaacagcagccagtctggacctgccatttgctgcatttgctcctagaggcctggactct
gaggagagcgatcccatggtgcagcctccagactctcccccctgcccgtcccccctgcag
gccagcctccactctcagggctccgagggatcaggacagcaggacgactttgtcatggtt
gatttccggccagccttctcaaaagacgacctgttgccgatggatttgggcaccttctac
cgagagtttcagaaccctccacagctggccagcctctcgctgcacatcagctcccagtcg
atggctgaagacctggactcgctgccagagaaactggccgtctacgagaaaaacatcgac
gagtttgacgcttttgtggacatgctgcagtag
DBGET
integrated database retrieval system
