Scomber scombrus (Atlantic mackerel): 133976499
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Entry
133976499 CDS
T10651
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133976499
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
133976499
NCBI-ProteinID:
XP_062270702
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Position
24:complement(11225926..11228034)
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AA seq
702 aa
AA seq
DB search
MLLWIVLLNAALCVASGNVTRDVCKEQICSCNEVEGDLHIDCEKRSFTTLQHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDIDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTLPYEGILEQIPGIAEVLLEDNPWDCNCDLVSLKEWLENIPQNALIGSVI
CEAPTRLQGSDLNETSEVDLCPSQSGGVDTSLVAPPTQDEISEPVAQAPRPTPYKPNGDA
SGPPTPGGHGPRSRSKSRENWQLKTRPTPVLTGVNSDREHNVTCPQPCNCKLVGSRQGLG
VNCEGKKIESLSNLKPKPLGAHELNLRDNNIHAVKKNQLLGYSSLNLLDLGGNNIKVIDN
STFQNQSELRWLYMDKNYLDTLIAEMFLGLVNLEYLSLEYNDIQLIVAGAFGPMPNLRVL
FLNNNLLKSLPVDAFLGISLSKISLHNNYFPYLPVTGVLDQLNSIIQIDLHGNPWDCSCN
IVPFKQWTEKLGADVIVSDLKCESPEEFWKRDFRHVRNDLMCPKLYDRISPTSLSKNSTF
TLDSGTRSNSYLEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRREGNSSA
SEINSLQTVCDSSYWHSGPYHADGGAHRGFDCSTHLSTTNDA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggattgttctgctgaatgcggctctttgtgttgctagtggaaacgttaca
agggacgtttgtaaggagcagatatgctcttgcaacgaggtcgagggagatctgcacata
gactgcgaaaaaaggagcttcaccactctgcagcatttgactggcccgagctcgcagttt
tatcacttgctgttgcacgggaattctctatccaggctatttcccaacgagttcgccaac
ttttacaatgctgtgagcctgcatttggaaaacaatggtttgcacgacattgtccccggc
gcctttctgggattgcagctggtgaaaaggctgcacatcaataacaataagataagatca
ttcaggaagagtacatttctggggttagacgacttggaatatctccaagctgattttaat
ctgttaagggatattgaccccgccgttttcagggacctaaataaacttgaagtgttaata
cttaacgacaacctcatcagtgcgctacctataaacgtgtttcaacatgtgcccattacg
catctcgacctgcgggggaaccgaatcaaaacgttgccttatgaggggatccttgaacaa
ataccgggcattgcggaggttttgttggaggacaacccgtgggactgtaactgcgacctg
gtttctcttaaggaatggttggagaacataccgcagaacgcgcttattgggagcgttata
tgtgaggctcccaccaggctgcaagggagcgacttgaacgagacgtcagaagtggatctg
tgcccttcacagagcggcggcgtggacaccagcctggtcgcccctcccacccaggacgag
atctcggagcctgtggctcaggccccgcgtcccacgccttacaagcccaacggagacgcc
agcgggccccctacacctggaggccacggacccaggagccgctccaaatctcgtgagaat
tggcagctgaaaacgaggcccactccggtgctgacaggtgtgaacagcgacagagagcac
aacgtgacgtgcccccagccgtgcaactgcaagctggtcggctccagacaggggctgggg
gtcaactgcgagggcaaaaagatcgaaagcctatccaaccttaaacctaaaccactgggc
gctcacgagttgaacttgagagataacaacatccacgcagtgaaaaagaaccagctgctc
ggctactccagcctcaacctgcttgatctgggtgggaacaacatcaaggtgattgacaac
agcactttccaaaaccagagcgagctgaggtggctgtatatggataagaactacctggat
acgctcatagcagagatgttcctgggccttgtgaatctggaatatctcagtttggaatac
aacgacatccagctgatagtggcaggtgcgttcggccccatgccaaatctgagggttctg
ttcctcaacaacaacttgctgaaatctttacccgtggatgctttccttgggatttcttta
tccaaaattagtctgcataataattatttcccctatctccccgtgactggtgtgttagac
cagctcaattcaatcatacagatcgatttgcacgggaatccgtgggattgctcgtgcaac
atcgtgcccttcaagcagtggacggagaaactgggggctgatgtgatagtgagtgatctc
aagtgtgagtcccctgaagagttctggaaacgtgatttccgccacgtccggaacgacctc
atgtgccccaaactctatgacagaatctcccccacctccctgtccaaaaacagcactttc
accctggactcggggacgcgctcgaactcttatttggagccgaatagggtctccatttct
gtgctcgtccccgggttgctgctggtgtttgtcacgtccgctttcactgtagtaggaatg
cttgtctttattttgcggaatcgaaagagatcaaagcggagggaggggaactcttctgcg
tcggagatcaattccttacagacagtttgtgactcgtcttattggcacagcgggccttat
cacgcagacggtggtgcgcaccggggcttcgactgcagcacgcacctctccacgacaaac
gatgcgtaa
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