Scomber scombrus (Atlantic mackerel): 133976559
Help
Entry
133976559 CDS
T10651
Name
(RefSeq) prospero homeobox protein 1-like
KO
K20211
prospero homeobox 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133976559
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
133976559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPD
AATF-Che1
NifQ
FapA
Motif
Other DBs
NCBI-GeneID:
133976559
NCBI-ProteinID:
XP_062270763
LinkDB
All DBs
Position
24:complement(6608416..6645892)
Genome browser
AA seq
900 aa
AA seq
DB search
MPDHDSTALLTRQTKRRRVDIGVKRTVGSALFTRARETLFNSMNQSHGPDQDGDCSLVSH
GHGGSNGDGEKSNVLRKLLKRANSYEDAIMPFPGATIISQLLKNNMGKNGGSDSGFQGSG
ALSSGGSEIQAEDACSSSSRDRDSPSDCLSPGPPLPPASSSSSFGRPPPPSNLNSHAATQ
PLSLSTFDLDRLSDEHLRAKRARVENIIRGMSHSPLVRPNTGDHNQESSRENESSGSDHR
GDGNSHNSSNHNHSRSDCPSSLLSSPGSRGGVVSVGEVYRENKRKQRLPQQQHSFTQLVC
SRQEQRQEERRQLKLQLEDMQKQLRQLQEKFYQIYDSETEEEEENGESGEADRGGEREED
GNLSEDSIRSDGLEERHRDRGRHSHNDLSELDPGLFLDRARALLREQALMDGEMEEDVEG
REEEERSGERVMKRRGGAAGGGGGGGRQLAETLKQELNCAVSQVVDTVVKGFSSPKQAAS
HHHGCHSSTPAAPSSSSNSSSSCPPPFGPLPSLTPDSRFGGGALALSLNGDGSPTPNYHS
SNQRLHCFGDVIVPSPLDSFSSLSSRLSGVPTPIDQTEALPLVVRKSGGGGGAENTNPSL
PPPPPPHHPSLHPSPLTATLGFSPPSFRHPFPLPLMGYPFHSPLGSHGGGAGYPPGPKDH
HRSSPDSMDMTRETVSLRTKMASLGGGHLGHHHHHHHHHHRQSSPSQHGPEGLSLSLIKS
ECGDLQDMADISPYSGSTIQEGLSPNHLKKAKLMFFYSRYPSSNMLKMFFSDVKFNRCIT
SQLIKWFSNFREFYYIQMEKFARQSINEGVTAADELAVGRDSELFRVLNMHYNKANDFEV
PERFLEVVQVTLREFFNAIVAGKDADPSWKKAIYKVICKLDSDVPDVFKSPNCLQELLHD
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcatgacagcaccgccctcctaacaagacagacaaagcgccgacgtgtcgac
atcggagtgaaaaggactgtgggtagcgcgctattcacccgtgccagggagacacttttc
aacagcatgaaccaatcgcacggccccgatcaggatggagactgctcgttggtcagtcac
ggccacgggggttccaatggagacggagagaagtccaacgttctgaggaagttgctgaag
agagccaactcgtatgaagacgccataatgccttttcctggcgcaaccattatctctcag
ctactgaagaataacatgggaaagaatggagggagtgactcaggcttccagggcagcggt
gctctatctagtggaggctcagagatccaggctgaggacgcctgcagcagctcctcccgt
gaccgggacagcccgtctgactgcctctcccctgggcctcctcttccccctgcatcatca
tcctcctcctttgggcggccaccacccccttcgaatctcaactcccacgctgccactcag
cccctctccctctccaccttcgacttggacaggctgtcagatgagcacctccgtgcaaag
cgagcccgtgtggaaaacatcatccgtggcatgagccactcgccgctggtccgacccaac
accggcgaccacaaccaagaaagcagccgtgagaacgagagcagcggcagcgaccaccga
ggggatggcaacagccacaacagcagcaaccacaaccacagccggagtgactgcccatcc
tccctcctgagctccccgggttcgcggggcggcgtggtcagtgttggtgaggtttaccgt
gagaataagagaaagcagcgcctgccacagcagcaacacagtttcacccagctggtgtgt
tccaggcaggagcagagacaggaggagagacggcagctgaaactgcaactggaagacatg
cagaaacagcttcgccaactccaggagaaattctaccagatctacgactcagagacagaa
gaagaggaggagaacggtgagagcggagaggccgaccgaggaggagaaagagaagaggac
ggaaacctgtcagaggacagtatccgctctgacggcctggaggagaggcaccgggacaga
gggcggcacagccacaatgacctatcagagctggatccaggcctgttcctggaccgggca
cgggccctcctccgagagcaggccttgatggatggagagatggaggaggatgtcgagggc
agagaggaggaggagaggagcggagaaagggtgatgaagaggagaggaggagcagcagga
ggagggggaggaggaggacggcagttagcagagacactgaagcaggagctgaactgtgcc
gtgtcacaggttgtcgacaccgtcgtcaagggcttctcttcgcccaagcaggccgccagt
caccatcatggctgtcacagcagcacaccagccgccccttcctcttcttccaactcgtcc
tcttcctgtcctccgccctttggccccctcccctccctcaccccggactcacgctttggc
ggtggcgccctagcccttagcctgaatggcgacggcagcccgaccccaaactaccactcc
tccaaccagaggctgcactgctttggcgatgtcatcgtcccgagcccgctggattcattc
agtagtttgagcagcaggctcagcggtgtgccaacacctattgaccaaacggaggcattg
cccctggtggtgcgcaagagcggcgggggaggcggtgcagagaacaccaacccatctctg
ccccctccacctcctcctcaccatccttccctccatccctcccccctaactgctacactg
gggttcagccccccatcgtttcgccacccattccctcttcccctcatgggttaccccttt
cacagcccattggggtcgcatgggggtggcgccggctaccctccagggccaaaggaccac
catcggtcctcccccgattccatggacatgacccgggaaactgtcagcctcagaaccaaa
atggccagcctaggagggggccatctcggtcaccatcaccaccaccaccaccaccaccac
aggcagagctccccgagccaacacgggcccgagggtctgtcgctgtccctcatcaagtct
gagtgcggggatctgcaagacatggctgacatatcgccctactcaggcagcactattcag
gagggtttatctcccaaccacctgaagaaagccaagctgatgttcttctactcccgctac
ccttcatccaacatgctcaaaatgttcttctccgacgtcaagttcaatcgctgcatcacc
tcccagctgatcaagtggttcagcaacttcagggagttctactacatccagatggagaag
ttcgcccggcagtccatcaacgagggcgtgactgccgcagatgaactggcagtgggccgc
gactccgaactcttcagggtgctcaacatgcactacaacaaggccaatgactttgaggtc
cctgagcgatttctagaggtggtccaggtgactcttcgtgaattcttcaacgccatcgtg
gccggcaaggatgcggacccgtcctggaagaaggctatctacaaggtgatctgcaaactg
gacagcgatgttcccgatgtcttcaaatcccccaactgtctacaagaactccttcatgac
tga
DBGET
integrated database retrieval system
