Scomber scombrus (Atlantic mackerel): 133976575
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Entry
133976575 CDS
T10651
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133976575 (ddx4)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
133976575 (ddx4)
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Other DBs
NCBI-GeneID:
133976575
NCBI-ProteinID:
XP_062270784
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Position
24:complement(16358458..16365587)
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AA seq
637 aa
AA seq
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MDEWEEGTVSTIPLTSYTSNEGTQGDSWNTDAGECARGRGGRGRGRGGFKSSHFSGGDGN
DGDKWNNAGERGGFRGRGGQGRGRGFARTDHSEFNGDDGGVCENGFRGGRGGRGSFSQSR
DLGGRGGFGGGYRGKDEEIFAQGENKDQEKKDDSDRPKVTYVPPTLPEDEDSIFSHYERG
INFDKYDDIMVDVSGTNPPQAIMTFDEAELCESLKKNVSKSGYVKPTPVQKHGIPIISAG
RDLMACAQTGSGKTAAFLLPILQQLMADGVAASRFSEQQEPEAIIVAPTRELINQIYLEA
RKFAFGTCVRPVVVYGGVSTGHQIRDIERGCNVVCGTPGRLLDMIGRGKVGLSKLRYLVL
DEADRMLDMGFEPDMRRLVGSPGMPSKENRQTLMFSATYPEDIQRMAADFLKTDYLFLAV
GVVGGACSDVEQTFIQVTKFSKREQLLDLLKTTGIERTMVFVETKRQADFIATFLCQEKV
PTTSIHGDREQREREQALADFRSGKCPVMVATSVAARGLDIPDVQHVVNFDLPNNIDEYV
HRIGRTGRCGNTGRAVSFYDPDADSQLASSLVTVLSKAQQEVPSWLEESAFSGPASTSFN
PPRKNFASTDSRKGGSFQDNSVQQAVQPPADDDEEWE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtgggaagagggaaccgttagtactattccattaaccagctacacctcgaat
gaaggcacacaaggagactcctggaacactgatgctggtgaatgtgcaaggggtcgcggt
ggaagaggcagagggagaggaggatttaaaagctcacacttttcaggtggagatgggaat
gatggggacaaatggaacaatgcaggagaaagaggtggtttcagaggtagaggcggccaa
gggcgtggcagaggatttgccagaacagatcacagcgaattcaatggagacgacggtgga
gtgtgtgaaaatgggtttcgaggagggagagggggaagaggaagtttcagtcaaagtcgg
gacctgggtggcagaggaggctttggaggaggttatcgtggaaaagatgaggagatcttt
gctcaaggggaaaataaagatcaagaaaagaaggatgatagtgacagaccaaaggtcacg
tatgtgccccccaccctccctgaagatgaagactccattttttcccattatgagaggggg
atcaactttgataagtatgatgacatcatggtggatgtaagtggaaccaatccaccacaa
gccataatgacttttgatgaggcggaattgtgcgagtcccttaaaaaaaatgtcagcaag
tctggttatgtgaagccgaccccagtgcagaaacatggcattccaatcatctctgctggc
agagatctcatggcctgtgcccagaccggatctggtaaaacggctgcattcctgctccct
attctgcagcagctgatggcagatggtgttgcagccagtcgcttcagtgagcagcaggag
cctgaagcaattattgtggccccaacaagggagctcatcaaccagatttacctggaggct
aggaagtttgcctttgggacatgtgtgcgtccggtggtggtttatggtggagtcagcact
ggacaccaaataagagatattgaaaggggatgcaatgtagtgtgtggaacaccaggcaga
ctattggatatgattggtagaggaaaggttgggctgagtaaactgcggtacctagtccta
gatgaggctgaccggatgttggatatgggatttgagcctgatatgcgccgtttggtgggc
tcacctggaatgccatccaaagagaatcgtcagactcttatgttcagtgctacgtatcct
gaggatatacagaggatggctgctgacttcctgaagactgactatttgttcctggctgtg
ggtgtggtgggtggagcctgcagtgatgtggagcagacatttatccaagtcaccaagttc
tccaagagagagcagctccttgacctcctgaagaccactggaattgagcgcaccatggtg
tttgtggagaccaagagacaagctgattttatcgccacgttcttgtgccaggagaaagtt
cctaccactagcattcatggtgatcgagagcagcgggagcgagagcaagctctggcagac
ttccgctctggtaaatgtccagtcatggtggcaacctctgtagctgcccgtggtctggat
attccagatgtacagcatgtggtgaacttcgacctccccaacaacattgatgaatatgtt
caccgtattgggagaactggccgctgcggtaacactggaagggcagtgtctttctatgac
cctgatgctgatagccaactggctagctccttggtcacagtcctgtccaaggcccagcag
gaagtgccgtcatggttagaagagtctgcgttcagcggacctgcttccactagcttcaat
ccacccaggaagaactttgcctccacagactccaggaagggaggatctttccaagacaac
agtgtgcagcaggctgttcagcctcctgccgatgatgatgaagaatgggaatag
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