Scomber scombrus (Atlantic mackerel): 133976640
Help
Entry
133976640 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133976640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133976640
NCBI-ProteinID:
XP_062270885
LinkDB
All DBs
Position
24:complement(261318..269605)
Genome browser
AA seq
1059 aa
AA seq
DB search
MASSSEEPKSSDIQILAPQKMPTRKEVLLGCLEDLGSDDFDKFKWYLRQQGVLEGFKPIP
KSQLEKANRTDTLDLMDKSYYKNTITVTRMILGKMNQNDLVGRLSHLSEPKESLAEDQPT
PKSKQKKIVQRLFLYCGLKKSESPAKCRRKLKSNLQKKFQCLFVGIAKAGNPTLLNEIYT
PLYITEGGTAEVNDEHEIRQIQTASRKPDRPEATIRQEDIFKDSSGRDEPLRTVMTKGVA
GIGKTVLTKKFILDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHLFFTETKEAG
ICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVMKSTSVDVLLTNLISGKLLPSARVWI
TTRPAAANQIPPWCVDMVTEVRGFDDPQKEEYFRKRFRDKKQARTIISHIKTSRSLHIMC
HIPVFCWITATVLQWTMKSSKIGELPDSLTEMFLLFVVLISNVKNTKYDGGDKKDLHWNP
DSRKMIESLGKLAFEQLQKGNLIFYESDLTECGINIRSASVYSGVFTQVFKEERGLNQDK
VFCFAHLSVQEFLAALHVHLTFINSGVNLLAEKRTSWWSKRRNDKSTHFYQSAVHEALES
PNGHLDLFLRFLLGLSLQTNQTLLRGLMTETGSSSENTQETVKYIKKKISKSLSAERSIN
LFHCLNELKDRSLVEEIQQSLRSGSLSTLKLSPAQWSALVFILLSSEKDLDVFDLKKYSA
SEKALLRLLPVVKASNKALLSGCNLSERSCVALSSVLSSQSSSLRDLDLSNNNLQDSGVK
QLSAGLESPHCTLETLSLSGCLITEEGCASLASALNSNSSHLRELDLSYNHPGDSGEKIL
SARLKDTLSLQPAGERWLTPGLKKYACELTLDPNTVNTNLKLSDNNRKVTYVKGDQSHPD
HPDRFDVFPQILCTDDLTGRCYWEVEWRGNVDISVSYRRISRKGGSEDCVFGRNDQSWSL
DCSDSGYSVYHNNSGTPISLSSSSSVSHRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTT
FTEPLCAGFRVQSGSVSLCRPRKESFLSEKLSHVFSIPT
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatccagcgaggagcccaaaagctccgacatacagatcttagcaccacaaaag
atgccaacacggaaagaggtcctcttggggtgtttggaggatttgggatctgatgatttt
gacaaattcaagtggtaccttcgtcagcagggagtccttgaaggcttcaaaccaatccct
aagagtcaactggagaaagcaaacagaacggacacactggatctgatggacaagagctac
tacaaaaacactataacagtgaccagaatgattttagggaagatgaatcagaatgatcta
gtggggcgtttgtcccacctctcagaacctaaagagagtcttgctgaggaccagcccaca
cccaagtctaaacagaagaaaatagttcagcgtctgtttttgtattgtggtctgaagaag
agtgaaagtcctgcaaagtgtcgacgtaaactcaagtctaacctgcagaagaagttccag
tgtctgtttgtggggatcgctaaagcaggaaacccaacccttctgaatgagatctacaca
ccgctctacatcacagagggagggactgcggaggtcaatgatgaacatgagatcagacag
attcaaacagcatccaggaaaccagacagaccagaagcaacaatcagacaagaagacatc
tttaaagactcatctggaagagatgaaccactcagaacagtgatgacaaagggagtggct
ggcattgggaaaacagtcttaacaaagaagttcattctggactgggctgaagacaaagcc
aaccaggacatacacttcacatttccattcactttcagagagctgaatgtgctgaaagag
aaaaagtacagcttggtggaacttgttcatctcttctttactgaaaccaaagaagcagga
atctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcga
cttcctctggacttccacaacaatgagatcctgactgatgtaatgaagtccacctcagtg
gatgtgctgctgacgaacctcatcagcgggaaactgcttccctctgctcgtgtctggata
accacacgacctgcagcagccaatcagatccctccttggtgtgttgacatggtgacagag
gtcagagggttcgatgacccacagaaggaggagtacttcaggaagagattcagagataag
aagcaggccagaaccatcatctcccacatcaagacatcacgaagcctccacatcatgtgc
cacatcccagtcttctgctggatcactgctacagttctgcagtggaccatgaagagcagt
aagattggagagctgcctgacagcctaacagagatgttcctcctcttcgtggtgcttata
tccaacgtcaagaacacaaagtatgatggaggagataaaaaagatttacactggaatcca
gatagcaggaagatgattgagtctctgggaaaactggcttttgagcagcttcagaaaggc
aacctgatcttctatgaatcagacctgacagagtgtggcatcaatatcagatcagcctca
gtgtactcaggagtgttcacacaggtctttaaagaggagagagggctgaaccaggacaag
gtgttctgctttgcccatctgagtgttcaggagtttctggctgctcttcatgtccatctg
acattcatcaactccggagtcaatctgctggcagaaaaaagaacatcctggtggtctaaa
agaagaaacgacaaatcaacacatttctaccagagtgctgtgcatgaggctttagaaagt
ccgaatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaat
cagactctcctacgaggcctgatgacagagacaggaagtagctcagagaacactcaggaa
actgtcaagtacatcaagaagaagatcagtaagagtctgtctgcagagagaagcatcaat
ctgttccactgtctgaatgaactgaaggatcgttctctagtggaggagatccaacagtca
ctgagatcaggaagtctctccacacttaaactgtctcctgctcagtggtcagctctggtc
ttcatcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgct
tcagagaaggctcttttgaggctgctgccagtggtcaaagcctccaacaaagctctgttg
agtggctgtaacctctcagagagaagctgtgtagctctgtcctcagttctcagctcccag
tcctctagtctgagagatctggacctgagtaacaacaacctgcaggattcaggagtgaag
cagctttctgctggactggagagtccacactgtacactggaaactctcagcctgtcagga
tgtctgatcacagaggaaggctgtgcttctctggcctcagctctgaactccaactcctcc
catctgagagagctggacctgagctacaatcatccaggagactcaggagagaagatcttg
tctgctagactgaaggacactctcagcctgcagcctgctggagaacgatggttgacacca
ggtctgaagaagtatgcctgtgaactcacattggatccaaacacagtgaacacaaacctc
aaactgtctgacaacaacaggaaggtgacatatgtgaagggggatcaatcacatcctgat
catccagacagatttgatgtctttcctcagatactgtgtacagatgatctgactggtcgc
tgttactgggaggttgaatggagaggaaatgttgatatatcagtgagttacagaagaatc
agcaggaaaggaggcagtgaagactgtgtgtttgggaggaatgatcagtcctggagtctg
gactgttctgatagtggttactctgtctatcacaataacagtggaacacccatctccttg
tcctcctcctcctctgtctctcacagagtagcagtgtatgtggactgtcctgctggcact
ctgtccttctacagagtctcctctgacacactgatccacctccacaccttcaacaccaca
ttcactgagcctctgtgtgctgggttcagagtccagtctggttcggtgtctctgtgtcgt
ccgaggaaggagagtttcctgtcagagaaactttctcatgttttttccataccaacctga
DBGET
integrated database retrieval system
