Scomber scombrus (Atlantic mackerel): 133976667
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Entry
133976667 CDS
T10651
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133976667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133976667
Ion channels [BR:
ssco04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
133976667
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Glycoprotein
Motif
Other DBs
NCBI-GeneID:
133976667
NCBI-ProteinID:
XP_062270910
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Position
24:complement(4571822..4578835)
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AA seq
554 aa
AA seq
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MEPKIDLTPTSATAALSCWILISCVLAEDWARVHTEDELFRSLFGGYSKWSRPARNVTDV
VIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWTDYKLQWSPSDFDNLTSIRVPSELIWVP
DIVLYNNADGEFAVTHMTKAQLFHTGRVRWVPPAIYKSSCSIDVTFFPFDQQSCKMKFGS
WTYDRAKIDLEPFETTVDLKDYWESGEWAIVNAVGTYNTKKYDCCHEIYPDITYYFIIRR
LPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSL
VIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSSATHTMPRWVRRLFLSAVPRWLCMKRP
HHGFGPVRTDKLLPVHTPGPSHSTSIWITQESDVDLHSYRDDNRCHSSPQLDSLDAGGEI
HYCDHHHYPNTDGFTRFGMKIAGRSRVSSPQVIGCTLLPQRHSSLSLDWNIPSLERGSIQ
SQLTSALSPAVISALEGVTYIAEHLRAEDADFSVKEDWKYVAMVVDRIFLWMFIIVCLLG
TVGLFLPPWLSGMI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagcctaaaatagatctgacaccgacttcagcgaccgccgcgctttcctgctggatc
ctcatcagctgcgtgctggctgaagactgggctcgtgtccacactgaggacgagctcttc
aggagtttgttcgggggctacagcaagtggtctcgtccagctcgcaatgtcaccgacgtg
gtcatcgtcaagtttggcctgtccatcgcacagctgatagacgtggacgagaaaaatcag
atgatgacgaccaacgtgtggctgaaacaggaatggacagattataaactgcagtggagt
ccttctgattttgacaacttgacgtccatcagagttccttctgagctaatctgggtgcca
gacatcgtgctgtataacaatgccgatggagagtttgctgtcacccacatgaccaaggcc
cagctgtttcacaccggtcgggtccgttgggtgcccccggccatctacaagtcctcctgc
tccattgatgtcaccttcttccccttcgaccaacagagctgcaagatgaagttcggctct
tggacgtacgaccgtgctaagatcgacctggagccctttgagaccactgtggacctgaag
gattactgggagagcggagagtgggcgattgtcaacgcggttggcacctacaacaccaag
aaatacgactgctgccacgagatctaccctgacatcacctactacttcatcatccgccgc
ctcccgttgttctacaccatcaacctcatcatcccctgcctcctcatctcctgcctgacc
gtcctggtcttctacctgccgtctgactgtggcgagaaaatcacattgtgcatctccgtg
cttctgtcgctgaccgtcttcctgctgctcatcaccgagatcattccatccacgtcgttg
gtcataccgctgatcggggagtacctgctcttcaccatgattttcgtcaccctgtccatc
gtcatcaccgtgttcgtgctgaacgtgcatcaccggtcgtcggccactcacaccatgcct
cgatgggttcggaggctcttcctatcggcggtgccacgttggctgtgcatgaagcgtccg
catcatggcttcgggcctgtaaggactgataaactcctaccagttcatactccaggccct
tcccacagcacctccatctggatcactcaggagtccgatgtcgatctccatagttaccgg
gatgacaaccgttgccacagtagtccccagcttgactccctggatgcgggaggtgaaatt
cactactgcgaccaccaccattaccctaatacagatggtttcacaaggtttgggatgaag
atagcaggacggtcgagggtgtcatcacctcaagtgatcggttgtaccctccttccgcag
agacactcttcactcagcttggactggaacatcccttctttggaacgtggttcaatccag
agccagttaacctctgccctgtctcctgcagtgatatcggccctggagggggttacctac
atcgcagagcatctgagagcagaggacgcagacttttcagtgaaggaagactggaagtat
gtcgccatggttgtggaccggatcttcctgtggatgtttattattgtgtgtctgctgggg
acagtcggactcttcctgcctccatggctctctgggatgatttag
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