Scomber scombrus (Atlantic mackerel): 133976793
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Entry
133976793 CDS
T10651
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
133976793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133976793
NCBI-ProteinID:
XP_062270973
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MIKTERILHLKSCRGRKVRVVREHYLREEVPCYSSLCQGGCVNDGKVLPGDLIHYVVPDV
GVVVDYMEILELRELQGIVFTQTACQGVQHSKGRRQYNRLRNLLKDPRHDCVLFANEYQE
YSYCPREKGESQEKWQTRCVYSAAVWYYNHLAGMRNVVMITDDQEAVAQYNSLNSGVYVM
SVQDYLRDFWQDLQAAHDLYSSISQTLQEKESVSAEGGKEYSEHLPSEILEAGIKSGRYI
QGTLNVNKHRSQHEASVRPEGITTKNTDRRGEVLVDGSKNRNRAVHGDVVVVELLPKSEW
RGKVTALSEGQTEEKRGDDSESKPMPTGRIVGILQRNWRDYVVTFPLREGPQPQTRNSQR
ILAVPWDNRIPKIRISTQQADALQDHRVVVRIDSWESTSLYPNGHSVRVLGRAGELETEI
STILIENSIHVPSFSDAQLKEMPVTSPEQPWSVDPVQVSERRDLRETHLVFSIDPRGCED
VDDTLSVRRVAGGTKLELGVHIADVTHFVTKGSLTDLEARARATTYYLADRRYDMLPSVL
SSDLCSLLGGVDRYAMSVMWELDAQTLDVNKVWYGRTLIRSSYQLHYELAQALLNGEEAE
VAELVQLGSEKRDAKLAELKQALETLTHVARHLRAKRDRGGALELEGVEVRAQLDKEKNI
TALVPRQPLEVHETVAECMIYANHWVARKIQEAFPHQALLRLHPPPRQEFFNQLVETATA
RGFTIDTSSNKALADSLDAASDPQDPQVNRMLRMLATHAMSQALYFSTGALTQDCFYHYG
LALDFYTHFTSPIRRYADIVVHRLLTAALDMEKESASAKTLDTNKELEHISQHINGKNRA
SQRAQQLSVQLFQCLYFKEKDPQTDESCVADALIYAIRDNGVLVFVSQYGVKAPVYMRNR
EGQVVSAGQDGSCDWQSGSVRRHSDHITTTSAGGTSTFRLFDHITVRISVQSSRCHADSL
NLELISNKPHRSDEPQQPRSQQSRSQLVQEVVRLEQQNQENKAARRPKPSREEREFSQSK
TPNLYSLLEEIRELALMEPSVSKQVCASTA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgataaagacggagaggatcctacatttgaagagctgccgggggcggaaggtgcgtgtg
gtgcgggagcattatctgcgggaggaggtcccgtgttacagctcactgtgtcaggggggc
tgcgtgaacgatgggaaagtgttgccgggagatttgatccactatgtggtgcctgatgtc
ggcgtggtggtcgactacatggagatcctggagttacgagagctgcagggcatcgtcttc
acccagaccgcctgccagggtgtgcagcacagcaaaggacgcaggcaatacaaccgtctg
cgaaacctgctgaaggaccctcgacacgactgtgtgctgttcgccaacgaataccaggag
tattcctactgtccgcgggagaaaggggaaagccaggagaagtggcagactaggtgtgtg
tactccgcagcagtgtggtactataaccacctggcaggtatgaggaatgtagtgatgatc
acagacgaccaggaagccgtagctcaatacaacagcctcaactctggagtctacgtcatg
tccgtccaggattatctgcgggacttctggcaggatctacaggcggcccacgatctgtac
agctccatttctcagacgctacaggagaaggagagcgtgagcgcggagggagggaaggag
tactccgaacatctgcccagtgaaatcctggaggccgggatcaagtctggacggtacatt
cagggcactctgaatgtcaacaagcatcggtctcagcatgaagcttcagtccggccggag
ggaatcaccaccaagaacacagatcggaggggggaggtgctggtggacggcagtaagaac
cgtaaccgggcggtgcacggcgacgtggtcgtggtggagctgctgccgaagagcgagtgg
agaggaaaggtaacggcgctgagcgagggacaaacggaggagaagagaggagacgacagc
gagagtaaaccaatgcctacaggtcgcatcgtggggatcctgcagaggaactggagggac
tacgtggtgacgttccctctcagggaaggacctcagccccagaccaggaactcccagcgt
attctggccgttccctgggacaaccgcatccccaagatccgcatcagcacgcagcaggcc
gacgctctgcaggatcacagagtggtggttcgtatcgattcgtgggaaagcacgtcgctc
tatccaaacggacacagcgttcgggttctgggtcgagccggagaactggagacggagatc
agcacgatcctcatagagaacagcatccatgtaccgtcgttctcagacgcacagctgaaa
gagatgcccgtcacctctccggagcagccttggtctgtggatcccgtccaggtgtcggag
cgtcgggacctgagagaaactcacctggtgttcagcatcgacccgcgaggctgcgaagac
gtagacgacacgctgtcggtgcgtcgcgttgccgggggaacgaagctggagctcggagtt
cacatcgcagacgtcactcactttgtgactaaaggatcgctcaccgacctggaggcacga
gccagagctacgacgtattacctggcggaccgcaggtacgacatgctgccttcagtcctc
agttcagacctctgctctctgctaggaggagtcgacaggtatgcaatgagcgtgatgtgg
gagctcgatgcccaaaccctggacgtcaacaaggtgtggtacggtcgcacactcatccgc
tcgtcctaccagctgcactacgagctggctcaggcgctgctgaacggagaggaggccgag
gtggcggagctcgtccagctcgggtcagagaagagagacgctaagctggccgagctcaag
caggctctggagacgctgacgcacgtagcaagacacctccgagctaaaagggacagagga
ggcgctctggagctggaaggagtggaggtccgagcccagctggataaggagaagaacatc
acggctctggttccccgccagccgctggaggtgcacgagacggtggccgagtgcatgatc
tacgccaaccactgggtggcgcgtaagatccaggaggcttttcctcaccaggctctgctg
cggctccatccgccaccacggcaggagttcttcaaccagctggtggagacggccaccgcc
agaggattcaccatcgacaccagctccaacaaggctttagcggactctctggacgcggcc
tcggaccctcaggacccgcaggtgaacaggatgctgaggatgttggctactcacgccatg
tctcaggctctgtacttctccaccggtgctctgacccaagactgcttctaccattacggt
ttggctctggacttctacacacacttcacgtcacccatccgtcgctatgccgacatcgtg
gtgcatcgccttctcactgcagccctcgacatggagaaggagtcggcctccgctaaaacg
ttggacaccaacaaagaactggaacacatttctcagcacatcaacggcaagaacagggct
tcccaacgtgcccagcaactgtccgtgcagctgtttcagtgtctgtacttcaaagagaaa
gaccctcagacggacgagagctgcgtggccgacgctctgatctacgccatccgagacaac
ggcgtgctggtgttcgtctcacagtacggagttaaagctccggtctacatgaggaatcgg
gagggtcaggtggtctctgcaggacaggacggcagctgtgattggcagagcggctccgtg
agacgacactcggaccacatcaccacgacgtccgccggcggcacttccaccttcagactg
ttcgaccacatcaccgtccgtatctccgtccagtcgtcccgttgccacgccgacagcctg
aacctggagttgatcagcaacaagccccaccgtagcgacgagccgcagcagcctcgctcc
cagcagagccgcagccagctggtgcaggaagtggtccgtctggagcagcagaaccaggag
aacaaggcggctcggcggcccaaaccctccagagaggagagagagttctcccagagcaaa
acacccaacctgtactctctgctggaggagatccgagagctggcactgatggagccgagc
gtcagcaagcaggtctgcgcctcgaccgcttag
DBGET
integrated database retrieval system
