Scomber scombrus (Atlantic mackerel): 133976998
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Entry
133976998 CDS
T10651
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133976998 (bbs1)
Cilium and associated proteins [BR:
ssco03037
]
Primary cilia and associated proteins
BBSome
133976998 (bbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
133976998
NCBI-ProteinID:
XP_062271123
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MEACPGGGQWLDAHYDPVACVNTFSSCVALADLSGDGENRLVVGDVGGSGGMKLKVFGGT
ALLSDSSLLDLPAGLAAFFMDLHEPRIPAVAVASGPSVYVYKNLRPYFKFTLPGSEVNVL
EQDVWQQVREGHIDHVTLKEMLESIRKQADVPLSVRSLHFLSLDAAATDEFVQLHKQQPI
RRQTVITCIATLKKSTADEDGVSCLVIGTESSDVYILDPEAFIILSKMSLPDAPSMMDVT
GQFDVEFRITVACRNGNIYILRRDSDKPKYCIELSAHPVGLVRVGKNVVVGCMDESLQAF
TQKGKKLWSVVLPAPVTTMASMDLPTRGFQAVLVGLANCEVHLYRDKNLLSTIKTPDAIS
SICFGRYGREDGTLIMTTKSGGLIVKILKRTAAFEDRDGAHGPPPAQSIRLNVPKKTKLY
VDQTLRERDCGAAMHRAFQMDLSRLRLAATKAYVKALESSLTPMSSSLTEPLKMNAVVQG
LGPSFKLTLNVQNTAACRPVMNLAISFLYDESLYRMRNPYMRIPLLVPGLVYPVETFVEC
TSDKGISDIIKVFVLHEGRSVPLLTAHINMPVSEGVTLN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtgtcctggcggaggacagtggttggacgctcactatgacccggtagcgtgc
gtgaacacgttctcgtcctgcgtggcgctggccgacctgagcggagacggagagaaccga
ttggttgttggagacgtgggggggtcgggggggatgaagctgaaggttttcggggggacg
gcgttgctaagcgacagctcgctgctggaccttcccgccggactcgccgccttcttcatg
gatctacacgaacccagaatccccgccgtcgccgtggcgtcgggaccgtccgtctacgtc
tacaagaacctcagaccctactttaagttcacactgccggggtcagaggtcaacgtcctg
gaacaggatgtgtggcagcaggtgagggaggggcacattgatcatgtgaccttaaaggaa
atgttggagagtatcaggaagcaggccgacgtgccgctgtccgtccgctcgctgcacttc
ctgtcgctggacgccgcggcaaccgacgagttcgtccagctgcacaaacagcagccaatc
agacggcagacggtcatcacctgcatcgctacgctgaagaagagcacagctgatgaggac
ggagtcagctgtttggtgatcggcacggagagcagcgacgtttacatcctggaccccgaa
gctttcatcatcctgtccaagatgtctcttcctgatgctccctccatgatggatgtgacg
ggtcagtttgacgtggagtttcgtatcacggtggcgtgtcgtaatgggaacatctacatc
ctgcgcagggactcggacaaaccgaagtactgcatcgagctgtcggcccatccggtgggt
ctggtgagagttgggaagaacgtggtggtcggctgcatggacgagagcctgcaggccttc
actcagaagggcaagaagctgtggtcggtggtcctcccggctcccgtcaccaccatggcg
tccatggacctgcccaccaggggcttccaggcggttctggtgggtctggctaactgcgag
gtccatctgtacagggacaagaacctgctgagcaccatcaagacaccggacgccatcagc
agcatctgcttcggccggtacgggcgtgaggacgggaccctcatcatgaccaccaagagt
gggggcctgatagtgaagatcctgaagaggaccgcagcgttcgaggaccgggacggcgcc
cacggcccgccgccagcccagagcatccgcctcaacgtacccaagaagaccaagctgtac
gtggaccagacgctgcgggagcgcgactgcggtgctgccatgcaccgagccttccagatg
gacctgagccgcctgcgcctggccgccaccaaggcctacgtgaaggctctggagtccagc
ctgacccccatgtcatccagcctcaccgagcctctcaagatgaacgcggtggtccagggt
ctgggcccgtccttcaaactcaccctgaacgttcagaacacggcggcgtgccggccggtc
atgaacctggccatcagcttcctgtacgacgagagcctgtaccggatgaggaacccctac
atgaggatccctctgctggtcccgggactcgtttaccccgtcgagaccttcgtggagtgc
accagcgataagggaatctctgacatcatcaaagtgttcgtcctgcacgagggccgcagc
gtcccgctgctgacggctcacatcaacatgcccgtcagcgagggagtcacgctcaactga
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