Scomber scombrus (Atlantic mackerel): 133977031
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Entry
133977031 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: HEAT repeat-containing protein 5A-like
KO
K24814
HEAT repeat-containing protein 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133977031
Membrane trafficking [BR:
ssco04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
133977031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_2
HEAT
HEAT_GCN1
HEAT_ECM29
TOR1L1_N
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
133977031
NCBI-ProteinID:
XP_062271158
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MERAHSLLLNEEAYSQLAEHQKAEFIFEWLNHLKKLLAASDRAEIKQNQRRLAEQLTSVL
IGSPGPPTRWLLAHCLAVLYRLGDPVPASLLVERCNDIIRSKDDSPSGLPTRLAAVACLG
ALFEQLGRLLVGLFKETLTNLLKAMKNAESQGRYEIMSSVEKMLQGLGVSAVPGHRDVYK
AARACLTDRSMSVRCAAAKCLLELQREAAFLWSSELENVATLCFRAFEGSNYNVRVSVAT
LLGTLLAAAVEPRHPAAAPRPSGRGRSSLEEVMDLLSGGFLRGGAGFLRASGDMLKGMSS
VGKDVRIGVTQACVVFVSSLGASWLEVNFSSFLSLLMELASHSRATQTPADAVVTRRCVS
FILRSTLGSLLGEKAQTNAAKQLCVAVATQKRAIDAALTDGNMETRVSSSDVSASQHVLI
CCLLELGRLIQGLGSTAAPLLTDSSTALLDTVISVLLHPVASARLAAAWCLRCVAMAMPS
QCSPLLDRCAERLVALKSSPEAVAGYGAAVAALVAAVQHCPLGIPHTKGKVVLSLAEDLL
RSASQNSRISLQRTQAGWLLVSSLITLGPAVVEHHLSRLLILWRCVFPASLREQEMELRR
GDYFTWQVTLEGRAGALCAMKNLLLHCRELVTDDVISRLLTPLACAVALLTKLPALVRSY
SSSVRLWSVVYRLRVYELLAQLPPQTYQESFGLVMNQLVSDLSGQDNLNQACSELTLLPT
FCHHDDLQLVGPALHDTDQRYIEEQLHGSSVGGGSLDNDPFSLCERTEEAPAPLPPPVAL
TAAAVQLFGALFPHIISAQRVRILEQFVETVNQLKGQRQQTVQTHICAALCSLLKQQGSV
RGSLGPDEMRPPVLSLLSGALESISPLLRCLAAEGLARLVQLVGDAGFTVSVSLLCFDRL
KTARDAASRSGYTLALGALHRYTGGISSPQHLSTCLGVLFTLSQDSTSPEVQTWSLHSLS
LVVDLSGGLYRLSARLRPSFTLVLRCCLSASPTHPEVHHSLGRCLHALIXCLGPDLQGDG
AALSALRSSCLVGCEVMRDGPDCLVQARAISCLQQLHMFSPPHVNLAXLVPALCVSTPEP
HLDTPEYT
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtgctcacagcctcctgctgaatgaggaggcgtacagtcagctggccgaacat
cagaaggcagagttcatctttgaatggttgaaccacctgaagaagctgctagctgcctct
gatagggctgagatcaaacagaaccagcgccgtctggccgagcagctaacgagcgttctg
attggctctcccggcccgcccacccgctggctgctggcccactgtctggccgtgctgtac
cgcctgggagaccccgtacctgccagcctattggtggagaggtgcaatgacatcatccga
agcaaagacgactcgccgtcaggccttccgacacgactggcggccgtggcgtgtctcggc
gctttgttcgagcagctcggtcggctgctcgtcggcttgttcaaagaaactctgaccaac
ctgctgaaggccatgaagaacgcagagtctcagggtcgctatgagatcatgtcgagcgtg
gagaagatgctgcaaggtttgggagtgagcgccgtgccgggtcaccgtgacgtctacaag
gcagcgagggcttgtctgaccgaccgctccatgtctgtccgctgcgccgccgccaagtgt
ctgctggagcttcagagggaggcggcgttcctgtggagcagcgagctggagaacgtcgcc
acgctttgcttcagagccttcgaaggatccaactacaacgtcagagtgtcggtggccaca
ctgctgggaacgctgctggccgccgccgtggagcctcgacatcctgccgcagccccccgg
ccgagcgggcggggccgcagctctctggaggaggtgatggatttgttgtcggggggcttc
ctgcggggcggggcggggttcctgagagccagcggagacatgctgaaagggatgagctcc
gtcggcaaggacgtccgaataggagtcactcaggcctgtgtggtcttcgtctcctctctc
ggtgcgtcctggttggaggtgaacttctcctccttcctgtctctcctgatggagttggcg
tctcacagcagagcgactcagactcctgctgacgctgtggtgacccgccgctgcgtctcc
ttcatcctaaggagcacgctcggctcgctgctgggcgagaaggctcagaccaacgccgcc
aagcagctgtgtgtcgccgtggcaacgcagaaacgagccatcgatgcagctctgactgat
gggaacatggagaccagagtttcttcctcagacgtctcagctagtcaacacgtgttgatc
tgctgtctgctggagctcggacgcctcatccagggactcggatccaccgccgcccccctc
ctgacggacagcagcacggccctactggacacggtgatctccgtcctcctccaccccgtc
gcctcggcacggctcgccgccgcctggtgtctgcgctgcgttgccatggcgatgccgtcc
cagtgctcgccgctgcttgaccgctgcgccgagcggctggtggcgctcaagtcttcccct
gaagccgtggccgggtacggagccgctgtcgccgccctggtggccgcggtgcagcactgt
ccgctgggaatacctcacaccaagggcaaggtggtgttgagtctggctgaagatctgctg
cgttcagcctctcagaacagtcgtatctctctgcagaggactcaggccggctggctgctc
gtctcctctctcatcactctgggtccagctgtcgtggagcatcatctctcccgtctcctc
atcctgtggcgctgtgtgtttcccgcctctctcagggagcaggagatggagctgcgacga
ggggactacttcacgtggcaggttacgctggaggggcgagctggggcgctctgcgcgatg
aagaacctgctgctgcactgcagagagctcgtcaccgatgacgtcatcagccggctgctc
acaccgttagcctgcgctgtggccctgctcaccaagttgccggctctcgtcaggtcttac
agcagttcagtgcgtttgtggtcggttgtttacagactgagagtctacgagctgctggct
caacttcctcctcaaacctaccaagagagttttggtttggtgatgaaccagctggtgtct
gatctgtcgggtcaggacaacctgaaccaggcgtgttcagagttgaccctgctgcccact
ttctgtcaccatgacgacctgcagctggtcggccccgccctccacgacaccgaccagaga
tacatcgaggaacagctccacggcagcagtgtgggaggaggctctctggacaacgacccc
ttcagtctgtgtgagaggactgaggaagctcccgctcctcttcctcctcccgtcgccctg
accgccgccgcagtccaactcttcggagcgctcttcccccacatcatctccgctcagaga
gtgaggatactggagcagtttgtagagacggtgaatcagctgaagggtcaacgccagcaa
accgtccagactcacatctgcgctgccctctgcagtctgctcaagcagcaggggagcgtt
cgggggtctctgggcccggatgagatgcgtcccccggtgttgtccctcctgtcgggggcg
cttgagagcatcagtcctctgctgcgctgcctagctgctgaaggcctggctcggctggtg
cagctggtgggagacgctggcttcaccgtgtccgtgtccctgctctgcttcgacaggctg
aagacagcgagggacgcagcctctcgcagcggctacactctggctctcggagcgctgcat
cgctacactggaggcatcagctcacctcagcacctgtccacctgtctgggagtcctgttc
actctgagccaggacagcacctcacctgaggtccagacctggtctctccacagtctctct
ctagtagtcgacctgtccggtggtctctatcggctctcggctcgactgaggccgtccttc
actctggtgctgcggtgctgcctgtcggcgtcgcctactcaccctgaggtgcatcacagc
ctgggccgctgcctgcatgctctcatcnactgcctgggccccgacctgcagggtgacggc
gcggcgctgtccgctctgcgctccagctgtctggtgggttgtgaggtgatgcgggacggt
ccggactgtctggttcaggccagagctatttcctgtctgcagcagctacacatgttctca
ccgccacacgtcaacctggcgngcctcgtacctgcgctctgtgtgagtacacctgaacca
cacctggatacacctgagtacacctga
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