KEGG   Scomber scombrus (Atlantic mackerel): 133977312
Entry
133977312         CDS       T10651                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137  Mitophagy - animal
ssco04140  Autophagy - animal
ssco04144  Endocytosis
ssco04145  Phagosome
ssco04148  Efferocytosis
ssco05132  Salmonella infection
Brite
Membrane trafficking [BR:ssco04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    133977312
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133977312
  Exosomal proteins of other body fluids (saliva and urine)
   133977312
  Exosomal proteins of colorectal cancer cells
   133977312
  Exosomal proteins of bladder cancer cells
   133977312
GTP-binding proteins [BR:ssco04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    133977312
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 AAA_7 NTPase_1 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT NB-ARC AAA_14 SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 133977312
NCBI-ProteinID: XP_062271408
LinkDB
Position
3:9368635..9375787
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERAKPSAETCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacatcaaggaagaaagtactacttaaagtcatcatcctcggagactctggagttggg
aagacctcattgatgaaccagtatgtgaataagaagttcagtaaccagtacaaagccaca
ataggtgctgatttcttaacgaaagaagtcatggtggatgacagacttgtcacaatgcag
atttgggacacagcaggtcaggagaggttccagtctttaggcgttgcgttctaccgggga
gcagactgctgcgtcctggtgtttgacgtgacagcacccaacaccttcaagactctagac
agctggagggacgagttcttgatccaggccagccctcgagatccggagaatttccccttt
gtggtgctgggcaacaagatcgacctggagaacagacaggtaacaaccaagcgagcacag
gcttggtgccagagcaagaacaacatcccctattttgaaaccagcgccaaggaggcgatc
aatgtggagcaggccttccagactattgcacgcaacgctcttaaacaggagaccgaagtg
gagttgtacaacgagttccccgagccgataaagctagacaggaacgagcgagccaagccg
tcagcggagacctgcagctgctga

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