Scomber scombrus (Atlantic mackerel): 133977341
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Entry
133977341 CDS
T10651
Symbol
si:ch211-220f16.2
Name
(RefSeq) golgin subfamily B member 1 isoform X1
KO
K20478
golgin subfamily B member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133977341 (si:ch211-220f16.2)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
133977341 (si:ch211-220f16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC39
ADIP
HAP1_N
TPR_MLP1_2
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
133977341
NCBI-ProteinID:
XP_062271486
LinkDB
All DBs
Position
1:complement(35788669..>35816310)
Genome browser
AA seq
2636 aa
AA seq
DB search
MLKWLSGEEGEPGSAGPGSPRGAGGGVGGVVLGGDIAVAEMSERLAQTEQLVAQLKEMIR
EKDATLRTKDEQMKVEKDTCEAKLSKLRLQNKAKVTSLSTQLEELKKQQGGPDTPTHSRK
GASEGGEQANRGKIVLLKKKVEELEHQLSQRQEELDNKRKELDAQRQRGEEMDVMLIEKD
KKLGEKEAYIVHLQTALAGDQPITPAPPQQVTEDSGAMQELQLLVQSLTRKVGEADERYS
LLQEQTESLKELLDSEKEQYSQKETMYKQNIQTFKDIIIQKDNQVMEVNQMHEQELFKLA
AKSDASADLEQLLKALKQKLHEKEEVLLGKTQVIDVLQSEVDGRDKTLKELMERLRRLQV
ERENLESKMEAEKHVMRAQLRDLMEKQQAEVRRISEQHQAQMDETQRDLTGQLEELRRSS
AAAPPVSQEASGSGNAPVDSDSVQRIADLEAQAKQKTEDASRSEAKFLKMKAWSKSRIRQ
LEEELKKSQAGVAPPDLTALRSHITALEEEREENLWKVEQYEELKAKNDMLEAKLVVYEE
QQRTLQADLEQFTKRAASQASESGSADDTQSQVLEWQEMVSDAVNARDRAREEKAAMVLR
ISHMEEEREGLIEDDWFFPGCSDPALASRQQELEEELAQSRGLGQQRAKKLAAPAQRSLQ
EDFEFDAQASFQDPRSASESTTPMEGENMGDGLRSVVEELELERNQLQEQILSLEERCQD
LEDRLQLQARIEALQNESEKLQSQLASLRNQQSRDAEKHQLLVSSLNEQLRGLSDTQECL
ESSLIEKENTLAKTSEKLELISSLRESLSAKETQYKEVSDKLLQAEHTLEEVSTKYSSSE
KQRSELKTEVADLTQKLSVLKEKTQKQETTIETLQTDLDQTNEDLDKLNTASLEERAQLI
HDLQSREREIDSLKDYLLEKDKEISYLTGHMAEYAEQVTVLKQELKLKEEHLVQVENALS
KAEREAMVIRDSQSSDQQSLNSKITELVGRLKDTEMEVVNTKEEMESKVAEVEHLIKQTE
EDKKIIQDLRGEIQKQTVSHRNHLSECETHITSLKEQLTSSTQKLQESEGVILQLKDKDT
NKEKQLNDKEQTYEEEVKSLKDEQNKLLAQVEKYNSDVETLSKQLKEQVQSEENIKKEMQ
EKLETIESLENQLKATDKQAEDERKKFNTELQVQESEKQKLSKELQIKTENFSKVKTLLK
NMKAEKQQLQEKHQGLTKELKQQTQNVKQLNEKVSSSLEVNGNLEKQLDSLTKEKERLEL
EVSERVKDISEVTVEKDSLQAKISTLETQLTQNNTIIEGLQRDKENLTAQSNELNRVLEQ
STNSNSEVLLEKTNECTHLNQLLREKEETAAQVQEQVQNLTSKVDQLQRDMTEKEQTASH
LQAQIQAQQNQQMQLEETLSLLREQEGALKSGLMDKDTTLQEKQEECNSLQNELSKLRAE
AESLNGERSQLCQQLEERGEMLKNVTQQCQNHKDELNDTNNTIKSLGDQIRVMEESARKF
ESEAEQRHTELTSLKSQIQTVAEENRQLRAACESREKELAQQTQVVSELDGQLKMTREEN
ANFSVKITCLTEDNQRLQEELAQNIKSVSELTAERSSLQERSSGLEIHIADNQKIINSLS
KEREELTVETNELKKILKESEMSNSAGLLEKTNECTHLSKTLREREEQLQSLLEQADGLK
MQVSQLDTSLNEKEQTASEKSSQLEAQHNQMLQLQDTISMLQEQGSVLKSGLMEKDTMLQ
QKAEECSVYQNEVMQHKDLLSQIQTEVESLRQQCLEAKQQIQQKDNTLIEVTSEFQNHKD
ELNKRNESVLSLSTQLGAMNENAAKMEVEITDLKATVQKVTAENSQLLQEVDQRKAEVID
CKDSIQAMKEQNTRLKSELQKKVTKLSSAHEEVTHLKAAVFERDSQLQTVGLERERLSMT
TQGKDDSLKQQNTFIQQLNSKVAEQEQQLKQKTDDSVGLRAQVSELEDSVCKFRSQVESL
TSESSMLKNTLEQKEQSSLESQNQSFSVAESLKSNLQVKEEECVTLKEQILHLEESVAKL
NNSLQVQISETADLKKVLEEKEAALLDQSKSLHDMQRRVDEALLFKTQFMESTELVSQLQ
SQIQMMSTDSGNLKKSTEETQSAFNNLQEKYACNLEELQDVRKQLSQSTDEVSNLQKLLD
DTNSGHQTATSTVETLRNELSAIQHKLDETQDLNSSLSKEKDEAFTSHKASVSLLTVEIE
RLKSQHLQVVAQINALTENLEQREMALHAINSQYTTQAKHTTQLVSEMQKLEEQNKRLNE
EISLSKEEQQRRHSAVSKENAHLQDEIRKLLSQKEELERRHHQIWASQEQQSSSMNEHVE
KMVSEKESLQAKPMDEIQQTVQMVQTGKEDRSRQEETTDLRSEGEKKETQTVKETVASAG
QSGLEEAVRRMEAERIHLHQNLQRCMYEIQQRDQYFQQLNTKLQQTVEEKGAVAAQLRAV
SHTLRDTQTRCHWLEAQGQAQQGSPYAEVAPGAPQERNNDSVISDTAEAGQLRERLLEVE
QSLADERARRETAEEALRLAEDRAKSVASSLSRDSQRDFSIEMETEEEWEALSLDPNQPL
LTQKVKGGMVACRRWLRGRSLYFSRLLTSRARSRYFFLAYLLTLHVLVLMCLTGAL
NT seq
7911 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtggctgtccggtgaggagggagagccggggtccgctggccctggttcaccc
cgcggtgcaggcggcggcgttggcggtgttgttctcggaggagacatcgctgtagcagaa
atgtcggagcgtttggctcaaaccgagcagctggtcgctcagctgaaggagatgatccga
gagaaagacgcaacgcttcgcaccaaagatgaacaaatgaaggtggagaaggatacgtgt
gaagccaaactgtcgaagctgcgactgcagaacaaggcgaaggtgacgtctctcagcacg
cagctggaggagctgaagaaacagcagggaggcccggataccccaacgcacagcaggaag
ggggcgtcagaaggaggagaacaagccaatcggggcaaaattgtgttgctaaagaagaaa
gtcgaggagctcgaacatcagctttcacagagacaagaagaactggacaataagaggaaa
gagttggatgctcagcggcagcgaggcgaagagatggacgtcatgctgatagagaaagat
aagaagctgggagagaaggaggcttacatcgtccacttacaaacagcgctggcaggagat
cagccaatcacacctgcacctccacaacaggtgacggaggacagcggagcgatgcaggag
ctccagctgctggtgcagagcctgaccaggaaggtgggagaagcagacgagcgctacagt
ttgctgcaggagcagacggagagcctgaaggagctgctggactcagagaaggagcagtac
agtcagaaagagaccatgtacaagcagaatatccaaacattcaaagacattattatccag
aaagataaccaggtgatggaagtcaaccagatgcacgaacaggagcttttcaagttagca
gccaagtctgacgccagtgctgatttagagcagcttttaaaggctcttaaacagaagctt
catgagaaggaggaggtgctgttgggtaaaacgcaggtcatcgatgttctccagagcgaa
gtggacggcagagacaagacgttaaaggagctgatggagcgtctgcgtcggctacaagtt
gagcgcgagaacctggaatccaagatggaggcggagaagcacgtgatgcgagcgcaactc
cgcgacctgatggagaagcagcaggcggaggttcgtcgaatcagcgagcagcatcaggct
cagatggacgaaacccagcgggacctaacggggcagctggaggagctgaggaggagctcg
gccgcagcgccgcccgtcagtcaggaggcttcaggaagcggaaacgcacccgttgattca
gactcggttcagaggatcgctgatctggaagctcaagcgaagcagaaaactgaagacgcc
agcagatcagaagccaagttcctgaaaatgaaagcttggtcgaagtcacgcatcagacag
ctggaggaggagctgaagaaaagccaggctggagtcgccccccccgacctgacggccctg
cggagtcacatcacagctctggaggaagaaagagaagaaaacttgtggaaagtggaacaa
tacgaggagctcaaagcaaagaacgacatgctggaggccaagctggtcgtgtacgaggag
cagcagaggacgcttcaagctgacctggagcagttcaccaagagagctgcgtctcaggcg
agcgagtcgggcagcgctgacgacactcagagccaagtcctggagtggcaggagatggtg
tcggatgcggtcaacgccagagaccgagccagggaggagaaagctgcgatggtcctccgc
atcagccacatggaggaggaacgagaggggctgattgaggatgactggttctttcctggc
tgctccgatccagcactggcctctcggcagcaggagttggaggaggagctggctcagtct
cgggggctcggccaacaaagggccaagaagctggcggctccggcccagcgaagcctgcag
gaggactttgagtttgacgcgcaggcctccttccaggaccctcgcagcgcctcggagagc
acgaccccgatggaaggcgagaacatgggagatggtttgcgttctgtggtggaggagctg
gagctcgagaggaaccaactacaggagcagatcctgagtctggaggagcgttgtcaagac
ctggaagaccggctgcagctgcaagctcgcatcgaggcgctgcagaatgagtcagagaaa
ctccagagccaactcgccagcctccgaaaccaacagagcagagatgcagagaagcatcag
ctgctggtcagcagtctgaacgagcagctcagagggctgagtgacacacaggagtgtctg
gagagctcactcatcgagaaggagaacacgttagccaagacatctgagaaacttgagctc
atcagcagcctgcgagaatctctgagtgcaaaagagactcagtacaaagaagtgtctgac
aaacttcttcaggcagagcacacactcgaggaagtttcaacgaaatacagcagctcagag
aaacaacgctctgagttaaaaactgaagtcgctgacctcacgcagaagctcagtgtgctg
aaggagaagacccaaaaacaggaaaccaccatagaaactttacaaactgacctcgatcag
acaaacgaagatctggacaaactaaacacagccagcctggaagaacgagcccaactcatt
catgatcttcaaagccgcgagcgggaaatcgacagtcttaaagattacctgttggaaaag
gacaaggagatctcatatctgactggtcacatggcggagtacgcggagcaggtcacagtg
ctgaaacaggagctcaaactcaaagaggagcacctggttcaagtagaaaatgcgctgagt
aaagcagagcgggaggccatggttatcagagactcacagagttcagaccagcagtctctg
aatagcaaaatcacagagctggttgggagactcaaggatactgagatggaagtagtcaac
accaaagaggagatggagtctaaagtggctgaggtggaacatctcataaagcagaccgaa
gaggacaagaagattattcaggaccttcggggagagatccagaaacagactgtgagccat
cgtaatcacctgtctgaatgtgaaacgcacatcacttcactaaaggaacagctgacttca
tccacccagaagctgcaggagtcagaaggagtcattttacagctcaaagacaaagatacc
aacaaagagaaacagcttaatgataaagagcagacgtatgaagaagaagtcaaatcttta
aaggatgaacagaataaacttttagctcaagtggagaaatataacagtgatgtggagacg
ttgtccaaacagttaaaggagcaagtacagagtgaggaaaatattaaaaaagagatgcag
gaaaaactggaaaccattgagtcactggaaaaccaactgaaagcaactgataaacaagcc
gaggatgaaaggaagaaattcaacaccgagctgcaagtccaggaatcagaaaagcagaag
ttgagcaaagaacttcagatcaaaactgaaaacttctccaaagtcaagacgctattaaaa
aacatgaaggctgagaaacagcagctgcaagaaaagcatcaaggattgaccaaggagctc
aagcaacagacgcagaatgtgaagcaactcaatgaaaaggtttcatcttctcttgaagta
aacggcaatctggagaagcaattagattctctcacaaaggagaaggagagacttgaactg
gaagtatctgaaagagtaaaagacatttcagaagttacagttgagaaagattctttacaa
gctaaaatatccacacttgaaacacagctcacacaaaacaacacaatcatcgaagggctg
cagagagataaagagaatttgactgctcagagtaatgagttgaatagagttcttgagcaa
agcacaaactcaaactcagaggtcctgctggaaaaaaccaatgaatgtactcatctcaac
cagttactcagagagaaggaggagacggcggcgcaagtgcaagaacaagtgcaaaacttg
acgtcaaaggtagaccagctgcagcgtgacatgacagaaaaagagcagaccgcctctcat
ctccaagcacaaatacaggctcaacaaaatcagcaaatgcagcttgaagaaacgttgtct
ttgcttcgggaacaggaaggcgctctgaagtctgggttgatggataaggatacaacgctg
caagagaaacaggaagagtgcaacagtttgcagaatgaactgagcaaactacgtgctgaa
gccgaatcgcttaacggagaacgctcacagctttgccagcagctcgaagagcgaggagaa
atgttgaaaaatgtgacccagcagtgccaaaatcacaaagatgaactgaatgatacgaac
aatactattaagtctctgggcgaccaaatccgtgtgatggaggaaagtgcaaggaagttt
gaatctgaagcagagcaaagacatacagagctgacgagcttaaagagccaaattcagaca
gtagccgaagaaaaccgtcaacttcgtgcagcttgtgaatccagagaaaaggagcttgcc
cagcaaacacaggtcgtatctgagcttgatggacagcttaaaatgactcgagaagagaac
gctaattttagtgtgaagattacctgtctgacagaagataatcagagactacaagaggag
ctggcacaaaacatcaaatctgtttctgaactcaccgctgagaggagttcactccaagaa
agaagttctgggcttgaaattcatattgcagataatcagaaaataattaacagcctgtcg
aaggaaagggaggagcttactgttgaaacaaatgaattaaaaaagatcctcaaggaaagc
gaaatgtcgaactctgcaggtttgcttgagaaaacaaatgaatgtactcatctgtcaaaa
acactgagggagagagaagagcaacttcagagtttactggaacaagctgacggtctaaaa
atgcaggttagtcaactcgacacatcattgaatgagaaagaacaaacagcatcagagaaa
agttctcagttggaggcccagcacaaccaaatgctgcagcttcaggacacgatatctatg
cttcaggagcaagggtctgtcctcaagtcagggctgatggagaaagacacaatgcttcag
cagaaagcagaggagtgtagtgtttatcaaaatgaagtcatgcaacacaaggatctcctg
tcacagatacagactgaggtagagtcactcaggcaacagtgcttagaggctaaacagcag
atacagcaaaaagataataccttaatagaagtaacaagtgagtttcaaaaccataaagat
gagctgaataaacgaaatgaatccgtgctttcactcagcactcagcttggtgccatgaac
gagaacgctgcaaagatggaggttgaaattaccgacttaaaggccactgtgcagaaagtc
acagcagaaaatagtcagctgctacaggaggtggaccagaggaaagcggaggtaattgat
tgtaaagatagcattcaagcaatgaaagagcaaaatactaggttaaaatctgaactacag
aaaaaagtgaccaagctgtccagtgctcatgaagaagtcacacatcttaaagcagcagtc
tttgagagggacagtcagctccaaacagtagggttagagagggagaggcttagtatgacc
acgcaaggaaaagatgattccctgaaacagcaaaacactttcatccagcaactcaacagc
aaggtcgctgagcaggagcagcagctgaaacagaaaacagatgacagtgtcggtttaaga
gcgcaggtttcagagctcgaagattcagtttgtaaattcagaagtcaagttgagagtctt
acttcagagtcatccatgctgaaaaatactttagagcaaaaagaacagtcaagtctcgaa
agtcaaaatcagtctttttctgtggctgagagtctcaaatcaaacctacaagtcaaagag
gaagagtgcgtcactttgaaagaacagattttacacctggaagaatctgttgcaaagctt
aacaacagcctccaagtgcagatatctgaaacagcagatcttaaaaaggttttagaagaa
aaagaggcagctcttctagaccaatcaaagtctcttcatgacatgcagagaagagtagac
gaggcgttgctcttcaaaactcagttcatggaaagcacagagttggtgtctcagctacag
agtcaaattcagatgatgtccacagactctggaaaccttaaaaagtcgacagaagaaaca
caaagtgccttcaacaaccttcaagagaaatatgcatgtaacttagaagagttgcaagac
gtaagaaagcagctgtcccaaagtactgatgaggtgtccaaccttcagaagttgttggat
gataccaacagcggacatcaaacagcaacgtccactgtagaaacactgagaaatgagtta
tcagcaatccaacacaaactagatgaaacacaagacttgaactccagtctttcaaaggaa
aaggatgaggctttcacatctcataaagcaagtgtgtcactgctgaccgtggaaatagag
agactgaaatcacaacatcttcaagtggtggctcagattaatgcactgaccgaaaacctg
gaacagagagaaatggctctccatgcaattaacagtcagtacacaacccaagccaaacac
acaacgcagctggtttcagaaatgcagaaactagaagagcaaaataagagactaaatgag
gagattagtttgtcaaaggaggagcaacagaggcgtcacagtgcggtcagtaaggaaaac
gcacatttgcaagatgaaattagaaagcttctttcacagaaagaagagctggaaagaagg
caccatcaaatttgggcttcgcaggagcagcagtccagcagcatgaacgaacacgtggag
aaaatggtgtctgagaaggagagccttcaagcaaagccgatggatgagatacaacaaaca
gtacagatggtgcaaactggaaaagaagaccgaagccgccaggaagaaacaacagatctg
aggtctgaaggagagaagaaggaaacccagacagtcaaggaaacggttgcttctgcaggt
cagagtggactggaggaggcggtgaggcggatggaagcagagaggatccatcttcaccaa
aacctgcagcgctgcatgtacgagatccaacagcgagatcagtatttccaacagctcaac
accaagctgcagcagacggtggaggagaaaggtgcggttgcggcccagctgagggccgtt
tctcataccctgagggacactcagacccgctgccactggctggaagcccaaggccaggct
cagcagggctcgccatacgctgaagttgcacccggagccccccaggagagaaacaacgac
tctgtcatttctgacactgctgaagccggtcagctgagagaaaggctgctcgaggtggag
cagagtctggcagatgagcgagcgaggagggagacagctgaggaggctctgcgtctcgct
gaggaccgagcgaagagcgttgcctccagtctgtccagagacagtcagagggatttcagt
atcgagatggaaacagaggaggagtgggaagctctcagtctcgacccaaatcagcctcta
ctaacacaaaaggtgaaaggcggcatggtggcgtgccggcggtggctcagagggaggagc
ctttacttctccaggctgctgacgagtcgcgcccgctctcgatacttcttcctggcctac
ttgctcactctacacgtgcttgtcctcatgtgcctcaccggtgctttgtaa
DBGET
integrated database retrieval system
