Scomber scombrus (Atlantic mackerel): 133977383
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Entry
133977383 CDS
T10651
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133977383
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133977383
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GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
Per3-like_PAS-A
PAS_9
PAS_4
PAS_2
bHLH_NCOA
bHLH_LHW
bHLH_INO2
bHLH_NPAS4
bHLH_HIF1A
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
133977383
NCBI-ProteinID:
XP_062271525
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Position
1:complement(20847642..20852209)
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AA seq
431 aa
AA seq
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MDLSFTMSRFMSSRSTNLVSSSTGTSSKNLSRKRKVSSVVYQFSMFLYRECGDQSGQDKN
AREAHSQTEKRRRDKMNSFIDELASLVPKCNIKSCKLDKLSVLRMAVQHMKTLQSSTAKH
HTEVNHKPAFLSEEELKHLILRAADGFLFVVDCDRGKILFVSESVDNILNYSKNDLIGES
LFDYLHPKDIAKVKEQLSSADIMPGERCINAKCGLSVKTDMNSCSLRLCSGVRRSFFCRM
KCNRPLLNMDEDDFSSTCVKKNAERKGFFTIHNTGYLKSWSPSEVDLDENNQLDIDGCHS
SCLVAVGRLHPHTVSQPAQYDIRVKPMEFISRHAIDGKFVFVDQRANAILAYLPQELLGT
SFYEYFHEDDIAHLAECHWQVLQMRKRINTNCYKLKIKDGSFITLRSHWFSFLNPWTKEV
EYIVSTNTVVT
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatctctcatttacgatgagcaggtttatgtcctcacgatcaaccaacctggtcagc
agctcaactggcacaagtagcaagaacctgtctcgcaaaaggaaagtcagctctgttgta
taccaattctctatgtttctgtacagagagtgcggtgatcagtcaggccaggataagaat
gccagggaggctcacagccagacagagaaaaggcgcagggataagatgaacagcttcata
gatgagttggcttcattagtgcctaaatgcaacattaaatcctgcaaactggacaaactc
tcagtcttgcgaatggcagtccaacacatgaagactttacaaagttctactgccaaacat
cacacagaagttaaccacaaacctgcattcctatctgaggaggagctaaaacacttaatc
ctgagggcagctgatggctttctgtttgttgttgattgtgatcgaggaaaaatactgttt
gtttctgaatcagtggacaatatcctcaattatagcaagaatgacctgattggcgagagc
ctgtttgattacttgcatcctaaagacattgcaaaagtcaaggagcaactgtcctcagct
gatatcatgccaggagagagatgcatcaatgcaaaatgtggtctttcagtgaaaactgac
atgaactcatgctctttgagactttgttctggggtgagacgctcatttttctgcaggatg
aagtgcaaccgacccctgctaaatatggacgaggatgatttttcctccacctgcgtgaaa
aaaaatgcggagcgtaagggcttcttcaccattcacaacactggatacttaaaaagctgg
tctccttctgaggtggatctggatgaaaataaccagcttgacattgacggatgtcactca
agctgtctggtggctgttggccggctgcatccccacactgtttctcagccagcacagtat
gacatcagggtcaagccgatggagttcatttcacgtcatgctattgatgggaagtttgtc
tttgtagatcaaagggccaatgctattttggcttaccttcctcaagagctgctgggaacg
tccttttatgaatactttcatgaagatgacattgcccatttagcagaatgtcactggcaa
gtgctgcagatgagaaagaggatcaatacgaactgctacaaattgaaaataaaagatggc
tcatttatcacacttagaagtcactggttcagtttcttgaatccctggacgaaagaggtg
gagtacattgtctccaccaacactgtagtcacgtaa
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