Scomber scombrus (Atlantic mackerel): 133977389
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Entry
133977389 CDS
T10651
Symbol
cacna2d3
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04260
Cardiac muscle contraction
ssco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133977389 (cacna2d3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133977389 (cacna2d3)
04261 Adrenergic signaling in cardiomyocytes
133977389 (cacna2d3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133977389 (cacna2d3)
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133977389 (cacna2d3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
WAK_assoc
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
133977389
NCBI-ProteinID:
XP_062271528
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Position
3:complement(18047708..18085522)
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AA seq
1031 aa
AA seq
DB search
MGPNLGTPCPEKYKELEKSVRVEEIDGLKLVKNVAVKMEEMFRRKAEATRRLVEAAEEAH
HQHEDNPDLQYEYFNAVLINEVDDEGNNVELGGEFLMEPNDHFNNLSVNLSLSVVQVPTN
MYNKDPDIVNGVYWSEALNKVFVDNFDRDPTLIWQYFGSAKGFFRQYPGVKWHPDEHGVI
GFDCRNRKWYIQAATSPKDVIILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAY
NQEIHYVEPCLNGTLVRADRANKDHFREHLDKLFAKGIGLLGDALDEAFTILNDFNRTGH
GSVCSQAIMLVTDGATEMYDNVFERHNWPERKVRIFPYLIGRESAFADNLKWMACANKGY
FSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQAHKLKEKAGPSLMT
TVAMPVFSTKNETKNQGILLGVAGTDIPLQELMKLIPKHMLGIHGYAFAITNNGYILIHP
DLRPLYQQGQKRRKPNYSSVDLSEVEWEDKDDILRNAMVNRRTGTFSMEVKKTVDRGRRV
LKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQPDVALADEWTYCN
TEEQHEHRHLTQIQAIKLFMTGRRPHLKCDRELIQEVLFDAVVTAPLETYWNGLALNKSE
NSDKGVEITFLGTRTGLSRTKLFVAPDQLSNKDFLTAEDKEGVFNADHFPLWYKRAAEQV
PGTFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEFFQRKFWTACRQC
TALDGKCSISCDNEDINCYLIDNNGFILVTEEQSQTGLFFGEVEGAVMNKLLQMGSFKRI
TLYDYQALCKDYAGSSDSARTLSDPFTVVKWLLTELVIFLLEFNLYSWWNIDLSVKAQRS
RGKTTMVPCDTEYPAFVSERTIKETTGNIDCEGCVRSFVIQQIPSSNLFMVVVDNKCDCS
ISPVVTMDPIEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENAMECGSATRLSGPLTAT
LLPLIAVTISR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggggccaaaccttggaactccttgccctgagaaatataaagagcttgaaaaatcagtc
agagtggaggaaattgatggtctgaaactggtcaaaaacgtggccgtaaagatggaggaa
atgttccggagaaaagcagaggccaccaggcgtctggtggaggcagcagaagaagcgcac
catcagcatgaagataatcccgacctgcagtacgagtactttaacgcggtgctgatcaat
gaagtggacgatgagggcaataacgtggagctgggaggagagttcctaatggagccaaat
gaccatttcaacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgcccaccaac
atgtacaacaaagaccctgacatagtgaacggcgtatactggtctgaggccctgaataaa
gtatttgtagataattttgatagagatccaacactcatttggcagtactttgggagcgca
aaaggtttcttcaggcagtaccctggagtgaagtggcatcctgatgaacatggggttatc
ggctttgactgtagaaacagaaagtggtacatccaggcagcgacttcacctaaggatgtc
attatcttagttgatgtaagtggaagtatgaagggactgaggctgaccatcgccagacag
actgtctcttccatattagacacacttggagatgacgacttcttcaacatcattgcatat
aatcaggagattcactatgtggagccctgtttgaatggcacgctggtccgggcagacaga
gccaataaagaccatttccgtgaacatctggacaaactgtttgccaaagggatcgggctg
ctgggggacgctctggatgaggcgttcacgatcctgaatgattttaatcggacgggtcac
ggcagtgtgtgcagccaggccataatgcttgtgacggatggggcaactgaaatgtatgat
aacgtttttgagaggcacaattggccagaaagaaaggtgcgcatattcccttacctgatt
ggacgagagtctgcgtttgctgataacctcaaatggatggcttgtgccaacaaaggttat
ttcagtcagatttccactttagcagatgttcaggagaatgtaatgaggtatcttcacgtc
atgagccgcccaaaagtcatcgaccacgagcacgacacggtgtggactgaagcttatgtg
gacagtgctctttcccaggcgcataagttgaaagaaaaagcaggcccaagtctgatgacg
acagtagccatgcctgtcttcagcacaaagaatgaaacgaagaaccagggtattctgttg
ggggttgcaggaacagacatccctctgcaggagttgatgaagctcatccctaaacatatg
ttagggattcatgggtacgcctttgccatcacaaacaacggctacatcctgatacatccg
gacctcaggcctttgtatcagcagggtcagaagaggagaaaaccaaactacagcagtgtg
gatctctctgaggtggaatgggaggacaaagatgatattctccgtaatgctatggtgaac
aggcggacagggactttctctatggaggtgaagaagacagtggatagagggaggcgagtg
ttgaagatgcacaatgactattactacactgacatcaaaggaactccattcagcgttgga
gtggctctctccagaggccacggcaaatacttcttcagaggaaatgtgtcagtcgaagca
gggcttcgtgatctggaacagccagatgtcgccctggcagatgaatggacgtactgcaac
acagaggagcagcacgagcatcgtcacctgacccagattcaagccatcaagctcttcatg
acaggccgcagaccgcacctcaaatgtgacagagagctgatccaggaggtgttatttgat
gcagtggtcactgctccactggagacctactggaatggacttgccctcaataagtcagag
aactcagacaaaggagtggagatcacctttctgggaacacgcacaggcctgtcaagaacc
aaactgtttgtagctcctgatcagctctccaataaagatttcctgacagcggaggacaag
gagggtgtgtttaatgctgatcactttcctctgtggtacaagagagcggcagagcaggtc
cccggcacatttgtctactcaatccccttcagcacagcattagaaaataagagtgtggtt
ttggccagcacagcaattcagctccttgatgacagaaaatctccaattgttgcagctgtg
gggatccagatgaagctcgagttctttcagaggaagttctggactgcatgcagacagtgt
acagctcttgatggaaaatgtagtattagctgcgataacgaggacattaactgttatctc
attgacaacaatggcttcattcttgtcacagaggagcaatctcagacagggctcttcttt
ggagaggtggagggtgctgttatgaacaaacttctccaaatggggtccttcaaaaggatc
acgctgtatgactaccaggccctttgcaaagactatgctgggagcagcgacagcgcacgc
actttatctgatccgttcactgttgttaagtggctcctgactgaacttgtcatatttctg
ctagaatttaacctgtacagctggtggaacattgatctttctgttaaagctcaaagatct
cggggcaaaactacgatggtgccgtgtgacacagagtaccctgcctttgtttctgaacgc
accatcaaagaaacaacaggcaacattgactgtgagggttgtgtcagatcttttgtcata
cagcaaattcccagcagcaacctcttcatggttgtagtggacaacaagtgtgactgcagc
atttctccagtcgtaaccatggatcccatcgaaatcatgtacaacgagtcactaaagtgt
gacagactgaagtttcagaaggacaggaagaagcctgaatcatgtcaccctttccaccct
gaggaaaatgcaatggagtgtggttcagcaacacgcctctctggtcctcttacagcaaca
ctgctgcctctgatagcagtgaccatcagcaggtga
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