KEGG   Scomber scombrus (Atlantic mackerel): 133977410
Entry
133977410         CDS       T10651                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
Ubiquitin system [BR:ssco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    133977410 (ubap2a)
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133977410 (ubap2a)
SSDB
Other DBs
NCBI-GeneID: 133977410
NCBI-ProteinID: XP_062271551
LinkDB
Position
3:11348553..11363701
AA seq 1279 aa
MMSSLGSDKARGPREKALPAATHTSQPQKQIQATAEQIRLAQMIYDKNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVSRAINFLLESTSDMTSWETVGKKKPLMKEGPSESKENKE
NRDKKGEREASKGRAAANRRGRGASRSRPARPEENGVEVTPVDRGSERGRRLKGGRGSGG
RGRGRAPAGSRFSAQGMGTFNPADYTSEARTGSTQSETWDTEASNSTDGTVAWRNTLEDW
AAEDWSEDVSLAETKVFTSSCAPTAENHITPGQSLDLASLLQKPVVGGREAPSSSSSQSL
VFTNSHHHQPPQQQQQAPPSRGTTSGTSYAHAALVKTQHALFPESFMYRIQRTDNMLSPS
LCQSSVLGAGFGDLGQAKRTQPSAGAQILEQLKGPGLGPLPSSQAAPPASTQGSNTSIGR
LPGLGAPVPPPSSSSWDMKASESNTTSLSSQFSREFGIQPEPSLVLSQLVQRHTGPSLPL
ARQPSPPSQQQAPPASASPAPQHTSTPAQTGTVMAVAVTKPPAPSAGLDPQGGSTPQQQR
AQLKGQKRRIPPTSKIPSTAVEMPGSSDVPGLNLQFGALDFGSESALPEFGVVDNCVSAA
SRESTPAPAPAPPASGPGTQSQTSLYSKPLSESLGNPLSVTLPPSLSSSEPVYHSSSVAL
PSLTPSSLGTASSTNPPSSSLTTSATSSSPYSTVGGSYDGTMPPHTRLAFSQSKEASGPV
MNGLNGVRSSAALDTSSASSTPKPESPSLNISTNGVPAPSSHLPSTLPAHSSSTLSSLAQ
DLPSASQLNSLNSHASSHSSALGSSSLTYTSVDSSSVSSLAPTSGYTSSQQPSVSALHST
HNSSNSSSISHLANMPNMGNNMSSTVGGITGTSGLHSAATASSIALGLGSNGATATSNLS
APRTTALLSSTGKAPPNLSQGVPPLLPNQYIMGPGGLLPAYPQIYGYEDLHMLQSRLPMP
SLQDYYGITFPGPAATLSGRDGNLANNPYSGEVTKFGRNDSTSPAPPTSLAAPQPPQGQS
QGQNQAQPQPPQAQPQPQGQPQHHSSQQAFLPPGYSYTGLPYYPGAVPSAAAFQYGHTMF
VPPGGPGPASAKQHSMGLGLGNPSASPFQQQTQQQPSGYGQHTFSSGYEELTAGPAGVDY
SKGYNSSSQTQAKSAAAGPGKGVSVTSSNSGVPDISGSVYNKTQSFDKQGFHAGTPPPFS
LPSALGGPGPLNPGAAPGGYAPAPFLHILPHQQPHSQLLHHHLAQDGQGGPNQRGQSSSL
QQKSQVNKSSYGSSPYWAN
NT seq 3840 nt   +upstreamnt  +downstreamnt
atgatgagctcgctgggcagcgacaaggcccgggggcctcgggaaaaagcgctgcccgct
gccactcacacttctcaaccacagaaacagatacaggctactgcagaacagatccggctt
gcccagatgatctatgacaagaatgatgctgactttgaggacaaagtcaaccagctgatg
gaagtgactggcaagaaccaggatgagtgtatggtagcgcttcatgactgcaacgaggat
gtcagcagagccatcaacttcctcctggagagcacctcagacatgacttcatgggagaca
gtagggaagaagaagcccctgatgaaggaaggtccatcagaaagcaaggagaacaaggag
aacagggataaaaaaggagagagggaggctagcaagggccgcgcagctgccaaccggagg
ggcaggggggccagtcgcagccgacctgcgcgtcccgaggagaacggtgtggaggtgaca
ccagtggacagaggttcagaacgaggtcgcaggctgaaaggtggtcgaggatctggaggt
cgaggaagaggcagagcaccagcagggagcaggttctcagcccagggcatggggaccttc
aatcctgcggactatacctcagaggctaggacagggagcacacagtctgagacatgggac
acggaggccagcaacagcacagacgggacagttgcctggaggaataccttggaagattgg
gcagctgaggactggagtgaggatgttagtctcgcagagaccaaagtgttcacttcctca
tgtgcacctactgcagagaatcacatcacacctgggcaaagtctggacctcgcctctctg
ctgcagaaacctgtggttggaggaagagaagcaccttcctcctcctcctctcagagtctg
gtcttcaccaactcccaccaccaccagccaccacagcagcaacagcaggcacccccgagc
cgtggcaccaccagtggcacaagctacgcacatgctgctctggtaaaaacacaacatgct
ctttttcctgaatcctttatgtatcggatacagaggactgataacatgctctccccctct
ctgtgccagtcgtcagttctgggcgccggtttcggggatctgggccaggccaagaggact
cagcccagtgctggagctcagatacttgaacagctgaagggtcctggcttgggtccgctg
ccctcatcacaggcagccccacctgccagcactcaaggaagcaacacctccattggtcga
ctgccaggcctgggagcacctgtacctccaccctcctcctccagctgggacatgaaggct
tcggaatccaacaccacctcgctgtcctcacagttcagccgtgagtttggcattcagcca
gagccttccctcgtgttgagccagctggttcagaggcacaccggcccttccttgcctctg
gcacgtcagcccagtcctccatcacaacaacaagcgccccccgcttcagcctcgcctgcc
ccccaacacaccagcacgccagcacagacaggcacggtgatggctgttgctgttactaaa
cctcctgcccccagcgcagggctggaccctcagggcggcagcacgccacagcagcagcgg
gcacagctcaaaggccagaaacgaaggatacctccgacatcgaagatcccctccacagcg
gtagagatgccaggctcatctgacgtcccaggcctaaacctccaatttggagcactagac
tttggctcggagtcagcattgcctgagtttggagttgtggacaattgtgtcagtgcggcg
tccagggagtccacgccggcccccgctccagcaccacctgcatcaggaccagggacacag
agccagacaagcttgtactccaaaccgctcagcgagtcgctgggcaaccctctctctgtg
accctgcccccgtccctctcctcatcagagccagtatatcactcttcctcggtggcgcta
cccagtctcacaccctcctcattagggaccgccagctcaaccaatcctccctcctcctct
ttgaccacatcggccacctcctcctctccgtactccacagtagggggaagttacgacggg
accatgccccctcacacacgactggccttttcccagagcaaagaggcctcgggaccagtc
atgaatggtctgaatggtgtacggtcctctgctgctttagacacttcatcagcgtcctcc
acaccgaagcctgagtcaccatctctcaatatcagcaccaacggtgttccagcaccctcc
tcccacctaccctccaccctgcctgcacacagctcctccacgctctctagcctggcacaa
gaccttccttcagccagccagctcaactcactcaacagccatgccagcagtcattcctca
gctctgggttccagctccctcacttacaccagtgttgacagcagcagtgtgagctctctg
gctcccacgtctggctacacgtcatcacagcagccctccgtctccgcactccattcgacc
cacaacagcagcaacagtagcagcatcagccacctggccaacatgcccaacatgggcaac
aacatgagcagcacagttggtggaatcactggcacgagcggacttcactctgctgccact
gcctccagcatagcactgggacttggctccaatggagctactgccacgtccaacctctct
gcacctaggaccacagccctcctctcctccactggtaaagctcctcctaacctgtcccag
ggagttcctcctctactacccaaccagtatatcatgggcccaggagggctgctgccagca
tacccacagatctatggctatgaggacctgcatatgcttcagtccagactgccaatgccc
tctctgcaggattactatggaatcacatttcccggccctgcagcgactctctctggcaga
gatgggaacctagccaacaacccctactcaggtgaagtcacaaagtttggcaggaacgac
tccacatccccagcaccccccacaagcctggcggccccgcagcccccccagggccagagc
caaggacagaaccaggcccagcctcagcctccccaggcccagcctcagccccagggccaa
ccacaacatcacagcagtcagcaggcctttctgcctcccggctacagctacacaggcctg
ccttactaccccggtgccgtacccagtgctgccgcattccagtatggccacaccatgttt
gtccctcccgggggaccaggaccagcctcggccaagcagcacagcatgggcctcgggctg
ggaaacccctctgctagccccttccagcagcagacacagcagcagcccagcggttacggc
cagcacactttcagctcagggtatgaggagctgacagcagggccagcaggagtggactac
agtaaaggctacaattcctcctcacagacacaagccaaatctgctgctgctggacctgga
aaaggtgtctcagtgacgtccagtaactcgggtgtgccagacatcagtggaagtgtttac
aataagacccagtcttttgataagcagggtttccatgcagggaccccccctccctttagc
ctgccatcagcgctggggggtccagggcctctgaacccaggagcagctcctggaggttat
gcaccggcccctttcctccacatcctgcctcaccagcaaccacactcacagctgctgcac
catcatcttgctcaggatggacagggtggtccgaatcagcgcggccagtccagcagcctg
cagcagaagagccaagttaacaagtcgagctacggcagctccccctactgggccaactga

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