Scomber scombrus (Atlantic mackerel): 133977522
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Entry
133977522 CDS
T10651
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04340
Hedgehog signaling pathway
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
133977522 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
133977522
NCBI-ProteinID:
XP_062271689
LinkDB
All DBs
Position
3:complement(22649267..22659516)
Genome browser
AA seq
1485 aa
AA seq
DB search
MPVDMQPHQGLYHYETSPSHPSRGIVPSDQSPYSDVSPLRAPLHNGPPQDCRAMYNPMTP
SMTHGSGSGQGIGHCLDQYMRPPHAPPPHIMMCPRGMPPTEGESDTPYCNQNNMMSSHHN
FCQVQSGSDQIGSGDGSRFSTPRSILKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAF
VNSRCNINGGSSYGHLSVSAMSPSLGYSSNINCQSRQQVSMYGGGGGTPLGGHTPGPCQG
SRLPPHNPRLHALPKHGHLKTEPGMVGVIDGMNVKSLEERSEGDVASPSSTGTQDPLLGL
LDGRDDLDKEDGKPEPEAVYETNCHWESCNKEFDTQDQLVHHINNEHIHGEKKEFVCHWQ
ECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVC
EHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHI
TKKHRGDTGPRPPGSAMTPGGQNSELLLEKEETRREDCKLLAPETALKSQPSPGGQSSCS
SERSPLGSTNNNDSGVEMNLNAAGSLEDLTALEDGVTVGGGGGEPGSVGGPLGMSAQALK
RLENLKIDKLKQIRRPTPPSRCVNNKLPALPGPVEPMGMCAASPLLSNRRVMELSNHELG
GGTSIGCTTNDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSEISQIGGPGGGGCHLLG
PDQGGGDTLSPETNRRGPPCPGGGLPGLPNLTPAQQYSLKAKYAAATGGPPPTPLPNMEQ
PGTPSRRGILNEYQGQPLPAFLQQGGLRRHSANTEYGTGVIYPHQAPGNNSRRASDPVRS
AVDPQALPKRFNSLNNVAMMGRRNALQHRGSDTSIARHLLSPRPPKITENVMMEAMGMES
HLAPVDARDRSMMMPFRGYQQQHQTIGGGGGGPLSNQLSPSHDSLGCPDQGYMQGHYQNQ
GGEVASRASGNPVGQARPIHPEGMSNTLLQQTEYSMSTCQLSPSGPHYPSLGQGADAGAG
AGPWSDTHSQVQTSSHALQNQRGMQYSDPSMPPQQIQAHFNNQTGLYNSPDATHKLTIKP
EHHFHPLMGGGDACQSSKLQQQRLLTQQSQGYPQQTGQVMIRNANNPSCDFQGQNQNFPS
GGGLSLGCAGSALSEGQRSETPMMQVKEMMVRNYVQSQQALLWEQQQEQQQQQQQSGIKP
PPLSDNTDMTGQTAMMQHSPQHQNQNLYSSQPYPSYPNQNLVMSPQAHSRGSSTVTPKDQ
QVTGLQGSCYSQEMVVPRPPQGQKPLLRQNSLSQVAGVYLGSPPHLSPVHSTSSPRRAVR
LPPVQHPQHPQHEMFSPSNNNNTYYSGQINMDMDNHMDPQNGPCLSQQLVIGSNLDLTGG
TKPAPLAPYPESGPISNALENLDLDNARIDFTSIIDDADSSSFSPVNNPLQGQPGSSSQA
LSRLTTPQTSVSLPGGSGLSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacaccaggggctgtatcactatgagacctcacccagccac
ccctccagaggcatagtcccatcggaccagtctccctacagtgatgtgtccccgctgcgt
gccccgctccacaacgggcctcctcaggactgcagagctatgtataatcccatgactccc
agtatgactcatggatcaggatcaggacaggggattggccactgcttggatcaatatatg
aggccccctcacgcccctccgccacacattatgatgtgccccaggggcatgccgcccaca
gagggtgagtcagacaccccctactgtaaccagaacaacatgatgtcctctcatcataac
ttctgccaagttcagtctggctctgatcagattggctccggtgatggctcaaggttctcc
actcctcgctccattctgaaactgagtaagaagagagctctgtccatatcccctctgtct
gatgccagtgtagacctgcagaccgtcatccggacatcacccaactccctggtggccttt
gtcaactctcgctgcaacataaatgggggcagctcttatggtcatctctctgtgagcgcc
atgagtccatccttgggctattccagcaatataaactgccaatccaggcaacaggtctcc
atgtatggaggaggcggggggacgcctctgggtggacacacaccaggtccctgccaaggt
tcccgcttgcctccccataatcctcggctccacgctctccccaagcatggacatctgaag
acagagccagggatggtaggtgtgatagatggcatgaatgtgaagagcctggaggagaga
tcagagggagatgtggcaagcccctcttccactggcactcaggaccctctcctgggtcta
ctggatggcagagatgacttggacaaggaggacgggaaacctgaaccagaggccgtctac
gaaaccaactgccactgggagagctgcaacaaggaatttgacacacaagaccaacttgtt
catcacattaacaatgagcacatccacggagagaagaaggagtttgtgtgtcactggcag
gagtgctctcgagaacagaggcctttcaaagcccaatatatgctggtggttcatatgcgt
agacacacaggagagaagccacataagtgcacttttgaaggctgtaataaggcctactct
cgcctggagaatttaaagacccacctgcgctctcacactggggagaaaccatatgtctgt
gaacatgaaggctgcaacaaggccttctccaatgcttcggaccgggccaagcaccagaac
cgaactcactccaatgagaaaccttatgtgtgtaagatccctggctgcactaagcgttat
acagatccaagctctctgcgtaaacacgtgaagacagtgcatggccctgaggcccacatc
acgaagaagcatcgaggagacacaggccctcgaccgcctggctcagctatgacccctgga
ggccagaactctgaactgctgctggagaaagaagagacacgacgagaagactgcaaactg
ttggctcctgagactgctctgaaatcccagccaagccctggtggtcagtcttcctgcagt
agcgaacgttctccactggggagcaccaacaacaatgacagcggggtggagatgaaccta
aatgcagcaggcagtctggaagatctcacagcactagaggatggagtaacagttggagga
ggagggggggagccaggtagtgtaggggggccactgggaatgtcagcacaggctctaaag
aggctggagaacctaaagattgacaaactgaagcaaatccgcaggcctacccctcccagc
cgctgtgtcaacaacaagctgcctgcacttcctggtccagtagagcctatggggatgtgt
gcagcctctccacttctctcaaatcgacgtgttatggagctgtccaaccatgagttagga
ggtggaacttcaattggttgcactactaatgacaggagaggaagtggcaccagcagtctc
agctccgcctatactgtgagccgtcggtcctctatggtgtctccttacttgtccagccgg
cgctccagtgagatctcacaaattggaggacctggagggggaggatgccacctcttaggc
ccagatcagggagggggagacaccctctctcctgagaccaatcgcagaggacctccatgt
cctggaggtggattgccaggtcttcctaatttaacacctgcccagcaatacagtctaaag
gccaaatatgccgcagcaactgggggaccaccacccactcctttacccaatatggagcag
ccaggcactccaagcagaagaggtattttgaatgaataccaggggcagcctctgcctgct
ttccttcagcaaggtggtctgcgtaggcacagtgccaacacagagtatggtacgggtgtt
atctaccctcaccaggctccgggtaacaacagcaggcgagccagtgacccagtgcgatcg
gcagtcgatccacaagctctccctaagcgctttaatagcctgaataatgtagccatgatg
ggcagaaggaatgcactgcaacaccgtggctctgacaccagtattgctcgccacctgtta
tcccctcggccacctaaaatcacagagaatgtaatgatggaggctatgggtatggagtcc
caccttgcccctgtggatgccagggatcgttccatgatgatgccattcaggggatatcag
caacagcatcagaccattggagggggaggtggaggacctctttcaaaccaactgtctcct
agccacgattctcttggctgcccagaccaaggttacatgcaggggcactaccagaaccag
ggaggggaagttgcttccagggctagtggaaatccagtgggccaagcaagacctattcac
ccagaaggcatgtctaatacacttctccaacagactgagtatagtatgagcacctgccag
ctaagtccctctggcccccattatcctagcttaggccaaggtgctgatgctggagctggt
gcaggcccttggagtgatacccacagccaggtccaaacatctagccatgctctccagaac
cagcgagggatgcagtattcagaccctagcatgccacctcaacagatacaggcccacttc
aacaatcagacaggcctctataacagtccagatgcaacccacaaactcaccatcaaacct
gaacatcacttccaccctttgatgggaggtggagatgcctgtcaaagttctaagctccaa
cagcagcggctgctcacccagcagtctcagggttacccacaacagacaggccaggttatg
ataaggaacgctaataatcccagctgtgactttcaaggacagaaccagaacttccccagt
ggagggggcttgagtttgggctgcgctggatcggcactgtctgaggggcaaagatcagaa
acccccatgatgcaggttaaggagatgatggtgaggaactatgttcagtcccagcaagca
ctcttgtgggagcagcaacaagaacagcaacaacagcagcagcagagtgggataaaacct
cctcctctttctgataatacggatatgactggccagacagcaatgatgcagcacagtcca
cagcaccaaaaccagaacctttactccagccaaccttatccttcctaccccaaccagaac
ctggtcatgagtccccaggcccatagccgagggtccagcactgtgacacctaaagaccaa
caggtgactggtctccaaggctcatgctatagtcaggagatggtggtccccaggccccct
cagggacagaaacctctccttcgccagaacagcctgtcacaggtagcaggagtctactta
ggtagcccaccccacctcagtcctgtccactccacttccagccccagacgagcggtccga
ctgcctccagtccaacatccacagcacccacaacatgaaatgttctctccttccaataat
aacaacacatactactcgggtcagatcaacatggatatggataatcacatggacccgcag
aatgggccttgtctcagccagcagcttgtaatagggtcaaacctagacctaacaggtgga
actaagcctgcccccctggctccctatcctgagtccggccccatctccaatgccttagaa
aacctggatctggacaatgctcgcatagacttcacctctatcatcgatgatgcagattct
tcctcattcagcccagtcaacaatccccttcagggtcagccagggtcttcctcccaggcc
ttgtcccgactcaccaccccccagacttctgtcagcctacctggcggctccggtctgtcc
aacatggctgttggtgacatgacgtctatgcttacctcactggctggggaaaataaatac
ctgaacacactgtcttag
DBGET
integrated database retrieval system
