Scomber scombrus (Atlantic mackerel): 133977530
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Entry
133977530 CDS
T10651
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00450
Selenocompound metabolism
ssco00970
Aminoacyl-tRNA biosynthesis
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
133977530 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133977530 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssco01007
]
133977530 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
133977530 (mars1)
Enzymes [BR:
ssco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
133977530 (mars1)
Amino acid related enzymes [BR:
ssco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
133977530 (mars1)
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133977530 (mars1)
Prokaryotic type
Other AARSs
133977530 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_N_2
GST_C_2
GST_C_3
GST_N_3
GST_C
Motif
Other DBs
NCBI-GeneID:
133977530
NCBI-ProteinID:
XP_062271699
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All DBs
Position
3:complement(22548819..22566500)
Genome browser
AA seq
919 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEETGVQCDVQCVNHEEKVVPFLSHPALPALLLPSGQHLFSS
DAICRYMFEVSGQESSELCNQWLEWEATDFQPALLQALHMAVLQGKGSEVPKVLQGPLNY
LDQRLSKGITPYLTGEVVSVADIVLWAALYPVFSDSSLSLGEHKFVRAWFDRVTGMRSCK
SAAQKVLQGKGLQGMKSYMQRQPAPQSSQCRDTHPCNSSPAESDEGERVVSEEEMGAAAL
AWNKGLNTCPFTTDRQHPILPQEGKRNILVTSALPYVNNVPHLGNIIGCVLSADVFSRYG
RLRDWNLLFVCGTDEYGTATENKAREEGLTPQQICDKYHAIHSSIYKWFQIDFDFFGRTT
TEKQTQISQNIFWRLHERGFLIEETVEQLRCENCKCFLADRFVEGTCPHCSYPEARGDQC
DKCGRLINAVELGEPQCKVCRQTPVIRSSRHLFLDLPKLEAQLEQWLDKSTRAGDWTANA
KQITRSWLRDGLKPRCITRDLRWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTDKWEK
WWKNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSR
GVGVFGDMAKDTGIPSDVWRFYLLYLRPEGQDSAFSWADMAMKNNSELLNNLGNFINRAG
MFVTKFFDGCVPAMELQQEDKKVLALVGWELQQYIQLMDKVKIRDALKHILNISRHGNQY
IQVNEPWKKIKGGDAERLRAGTVTGVSVNVACLLSVMLFPYMPTVSQTIRDQFNAPNSCM
NTMLQGTGTFVCVLSAGHRIGTVSPLFQKLEVDQIEALKKKFGGQQMTAQSAASTQSATM
PAPAVAAEVAAVNGVDPEKAKQLTQAVAEQGDKVRVLKAQKAEKAVITAEVAQLLDLKKQ
LALAEGKSPEPAPQKGKKK
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctttgtaagtgaaggcaacccgcattgcctcaaagtgttagccgcgttagaa
gaaactggagttcagtgtgacgtccagtgtgtcaaccacgaagagaaagtcgtgcccttc
cttagccatccagccttgccagccctgctcctacctagtggacagcaccttttcagctcc
gatgccatctgccgatacatgtttgaagtaagtggacaagaatccagtgagctttgcaac
cagtggctggaatgggaggccacagattttcagcctgcactgctacaggcccttcacatg
gcagtgctgcaggggaaaggatcagaggtccctaaagtcctccaggggcccctaaactac
ttggaccaacgtttaagcaaggggatcacgccatatttaactggggaagttgtttcagtt
gctgatattgttttgtgggctgcgctgtaccctgttttctccgactcttcactgtctttg
ggtgaacacaagtttgtgagggcttggtttgaccgtgtgactggaatgcgcagttgcaag
tctgctgctcagaaagtgctgcagggtaaaggcctgcagggcatgaagagctacatgcag
aggcagcctgcccctcaaagcagccagtgcagagacacacatccatgcaacagcagccct
gctgagagtgacgaaggggagcgtgtggtttcagaagaagagatgggggcagctgctctt
gcctggaataaaggtttaaacacctgtccattcactacagacagacaacacccaattttg
ccacaggagggcaagcgaaacatcctggtgaccagcgccttgccgtatgtcaacaacgtc
ccccacctgggaaacatcatcggctgtgtcctcagtgctgatgtcttctccaggtatggc
cgcctgcgagactggaacctgctgttcgtatgtggcacagatgagtatggcacagctaca
gagaacaaagccagagaagaaggcctgactccgcagcagatctgtgacaagtaccatgcc
attcactccagcatctacaagtggttccagattgactttgacttttttggcaggaccacc
acagagaagcaaacacagatatcccagaatattttctggagactccacgagcgtggtttc
ctaattgaagagacagtggagcagctgcgttgtgagaactgtaagtgtttcctggctgac
cgttttgtagaaggcacctgtccccactgcagctacccagaagcacgtggagaccaatgt
gacaagtgtgggcggctcatcaatgctgtggagctcggggaaccccagtgtaaagtctgc
aggcagactccagtcattcgctcctccagacatcttttcctggacctgccaaagctggag
gctcagttggagcagtggctggacaagtcaaccagagcaggagactggacagcaaatgcc
aaacagatcactcgctcctggctgagagatggactcaaacctcgctgcatcaccagggac
ctgcgatggggaacgccagtacctcaccccgactttaaagagaaggtgttctacgtgtgg
tttgatgcccccattggttatctgtccattacagccaactacactgacaaatgggaaaag
tggtggaagaatcctcatcaggtggagctgtacaacttcatggccaaggacaatgtgcca
ttccacagtgtggtgttcccctgctccctactgggagctcaggacaactacactctggtc
aatcaccttgttgccactgaatatctaaattatgaggacactaagttctccaagagtcgt
ggtgttggtgtgtttggagatatggccaaggatactggtatcccgtctgatgtgtggcgg
ttctacctgctgtatctgcgtccagaaggacaggattcagccttctcctgggctgacatg
gctatgaagaacaactcagagctgctcaacaacctgggcaacttcatcaaccgagctggc
atgtttgtcactaagttctttgatggctgcgtgcctgcgatggagctccagcaggaagat
aagaaggtcctggctttggtaggctgggagctgcagcagtacatccagcttatggacaaa
gtcaaaatccgtgatgctcttaaacacatcctaaacatctctcgccatggcaaccaatac
attcaggtcaatgaaccctggaagaagatcaagggaggagatgcagaaaggttgcgtgcg
ggcacagtgaccggcgtgtctgtgaatgttgcctgcttgctgtcagtgatgctgttccca
tacatgccaaccgtcagtcaaaccatcagggatcaattcaacgcccctaactcttgcatg
aataccatgttgcaaggcactggcacgttcgtatgtgtcctgagtgccggccaccgcatc
ggcactgtcagtccgttgttccagaaattagaagtggaccagattgaggctttgaagaag
aaatttggtggacagcagatgacggctcagagcgctgccagcactcagtccgccactatg
ccagctcctgctgtggctgctgaggtggcggcggtgaacggcgtggacccagagaaagcc
aagcagctcactcaagccgtggctgagcagggggacaaggtgcgagtactcaaagcccag
aaggcagagaaagctgtgatcacagcagaagtggcccaactgctggacctcaagaaacag
ctggcgctggcggaagggaagagccctgagcctgcacctcagaaggggaagaagaagtga
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