Scomber scombrus (Atlantic mackerel): 133977612
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Entry
133977612 CDS
T10651
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133977612 (ap5b1)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
133977612 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
133977612
NCBI-ProteinID:
XP_062271800
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All DBs
Position
3:4850764..4856279
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AA seq
952 aa
AA seq
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MAANWAERISAFSRSPSRFLSGTTAEAFLAELLRELRDDRASYSVKVLLLSPLCEHPTLL
CPSDSVGEETALELMSVFAQCPSKSVQFHCSLLLAITSVLICTSCVSNRSRASQDFVDQL
LQLSQDTGDLQGDGALRSLRATACDCLRELEACCPGLLSQRLELLGALRLKETSRIHQAY
AGLHTLVLRNAVYQLAQETGAGADHLKALLGGNTSVAWEAEQDSDLMNNKDSSILSSLIL
GPMGTIPTLQTGPDCKELRSVLSSLLEESYLLTPQCQAALLHRLIEVVAMVPGVPPAIFR
AQLLRLLGTSEVGLLHSTLLLKCAFTDSLFSAEDEAFILKRLVVLSQHPLLTTPEKLFYT
DCLLHFPENRPISCGDGDESLPVLLTPQLASALLPTVFNDSDTMLSRLNLLCLVYLEEEE
EGEEEGKGLSYLYEHLTALLRIVENGGSREIVVTFFRAAFLFLFYFRHVERFSGGLTEKL
CELYLRHTRLAPHLINLADQTQERLSESTWAVGFLRALQRVITEAPLAKLTIQDLSRHLK
MLARVAEEGEIPQHSTISFLSSVITASSSSLCVSGDWRLGNSVLGVCRRLLVHPTLDSLL
NALADILQHLAGRYGDTDIQDHARLYYTLLTTLSKEKLAGVLAQGASEGGRQVAKRTLSC
IMSESEELTGVLTIHQTEKPIVKLVELDDSELQEEKQMDRESDSSTNDTCPDEASAAVRT
YRAQFHHPDFPSEIVLRYRLTYTEDHDPRFDQLFSIRLHFNLTDDHYEELGDTSVPCLFR
ERTPPVVKLRLKPWRPYPTVLHASAIFTTQDGLSCHTLLPDVRVLFQQTFTPLPAPTTWG
TGGKLKVFDGLWDEICSESGEDGATSLFCCQLEEAALEALVEKHFLPYLISDPSREEEEH
KVLLFLPPRSHMLLKIRREEDAVHFDIATDNWQLLPHANSFLVTVTSSQEDR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaactgggccgagaggatctctgctttctcccgcagtccgtcccgcttcctc
tccgggacaacagcggaggctttcctggcagagctgctccgtgagctccgggatgacaga
gccagctacagcgtcaaggtcctcctgctgtccccgctctgcgagcacccgaccctgctg
tgtccctcagactctgtgggagaggagacagctctggagctcatgtctgtgttcgcccag
tgtccttccaaatccgtccagtttcattgcagtctcctcctggccatcacatctgtcctc
atctgcacctcctgtgtgagcaaccgctcccgtgcgtctcaagactttgtggaccagctc
ctccagttatcccaggacaccggggacctccagggtgacggggctcttcgttctcttcgg
gccacggcgtgcgactgcctgcgggagctggaggcctgctgccccggccttctctcgcag
cgcctcgagctcttgggtgcgcttcggcttaaagaaacctccaggatccaccaggcctac
gcaggactccacactctggtgttaagaaacgcagtgtatcagctggcacaggaaacagga
gcaggtgccgatcatcttaaagctcttctgggaggaaatacatcagttgcatgggaagca
gagcaggactcagacctgatgaataacaaggactcatccatactgtcttccctcatcctg
ggccccatgggtacaatccccactctccagactggacctgactgcaaggagttacgctcg
gtcctgtcctccctgctggaggagtcctacctcctcactcctcagtgtcaagctgcgctg
ctacatagactgatagaggtggtcgccatggttcccggtgtcccccctgccatattcaga
gctcagctgctgcgactgctgggcacgagcgaggtcggcctcctccacagcactctcctg
ttaaagtgcgcgttcaccgacagcctgttcagcgccgaggacgaagccttcatcctcaaa
cgtctggtcgtcctctcccagcaccctctgctcaccacgcccgaaaagcttttctacacc
gattgcctcctgcactttcccgagaaccgacccatcagctgcggcgacggcgacgagtcc
ctccccgtgctgctcaccccccagctggcctccgctctgctgcccaccgtgttcaacgac
agcgacaccatgctgtcccgcctgaacctgctgtgtctggtctacctggaagaggaggag
gaaggggaggaggaaggcaaggggttgtcctacctctacgaacatctcactgcactgctc
cgcatcgtggagaacggcggcagcagagagatcgtcgtcaccttcttcagagccgccttc
ctcttcctcttctacttccgccacgtggagcgcttctcaggaggcctgacggagaagctg
tgcgagctctacctccgacacacccgcctggcaccgcacctcatcaacctggccgaccag
acccaagagaggctctcggagtccacctgggccgtcgggttccttcgagcgctgcagagg
gtcatcacggaggccccgctcgccaagctcaccattcaagacctcagccggcacctgaag
atgctggctcgagtggcggaagaaggagagatccctcagcactccaccatcagcttcctc
tctagcgtcatcaccgcgtcttcatcgtcgttatgcgtgagcggtgattggcgcctaggg
aacagcgtgttaggggtttgtcggcgcttgctggttcacccgactcttgactccctactc
aacgctcttgcagacatccttcagcacctcgccggtcgctacggagacacggacatccag
gatcatgcccgcctctactacaccctcctcaccactctgtctaaagagaagctggccgga
gttttggcgcagggagcgagcgaaggagggcggcaggtggcgaagaggactctgtcgtgc
atcatgtcggaaagcgaggagctgaccggggtcctgacgatacaccaaactgagaagccg
atagtcaagttggtcgagttagacgattccgagctacaagaagaaaaacagatggatcgt
gaaagcgactcaagcaccaacgacacatgtccagacgaggcgagcgcagcagtgagaacc
tacagagctcagttccaccaccctgacttcccctctgagatcgtcttacgctaccggcta
acctacaccgaagatcacgaccctcgattcgatcagctcttcagcatccgcctgcacttc
aacctcacggacgaccactatgaagagcttggcgacaccagcgtgccctgtctcttcaga
gagaggacgccgcccgtggtgaagctgaggctgaaaccatggcggccttaccccaccgtc
ctccacgccagcgccatcttcaccacccaggacgggctttcttgccacacgctcctccca
gatgtgcgcgtgttgttccagcagaccttcacgccgctacccgctcccacaacttgggga
accggcggcaaactgaaggtgttcgatggactgtgggacgaaatctgctcagagagcggg
gaggatggagccaccagcctgttttgctgccagctggaggaggcggcgctggaggccttg
gtggagaaacacttcctcccctaccttatatcagacccgtcccgcgaagaagaagaacac
aaagtgcttctcttcctccccccacgctctcacatgctgctgaagatcaggcgcgaggag
gacgccgttcattttgacattgccacagataactggcagcttctgcctcacgccaactct
ttcctggtgactgttacatcctcgcaggaagacagataa
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