Scomber scombrus (Atlantic mackerel): 133977710
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Entry
133977710 CDS
T10651
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133977710 (ift52)
Cilium and associated proteins [BR:
ssco03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
133977710 (ift52)
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
Motif
Other DBs
NCBI-GeneID:
133977710
NCBI-ProteinID:
XP_062271947
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Position
3:6277540..6281349
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AA seq
435 aa
AA seq
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MEKEQHNSVVFNASKRELFTMNNGYKSMQKRLRAQWKIHSMKEELSIEKLKGVKLWITAG
PREKFTASELEVLKHYLDSGGNVLVMLGEGGEMKYDTNINFLLEEFGIMINTDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVITGITEDENVGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFFQGKEAGKLVVLGSCHMFSDQYMDKEENSKIMDVVLQWLM
TENIQLNQIDAEDPEITDYTMLPDTGCLSEQLRVCLQEGDENPKDFTSLFDMALFNLSTD
TLPQVISAYKQLNVKDEPLQLITPQFETPLPQLQPAVFPPALSDLPPPMLDLFDLDETFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKDQRDAKHILEHIFFQVVEFKKLN
QEHDIDTEAQFTPGQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaacagcacaactctgtggtcttcaatgcctctaaaagagagctctttact
atgaacaatggatacaaatccatgcagaagagactccgggctcaatggaaaatacacagt
atgaaggaagagctgtctattgagaagctgaagggtgtcaagttgtggataactgcaggg
ccaagggagaagttcacagcatcagagctggaggtgctgaagcactacctggacagtgga
ggaaatgtcctcgttatgctcggcgaaggaggggagatgaaatatgacaccaatattaac
tttctcctggaggagtttgggataatgatcaacactgatgcagttgtgaggaacgtgtat
tacaagtacttccatccaaaggaggcgctcgtatccaatggtgtattgaacagagagatc
agtcgagctgctggcaaagtgatcacaggaataactgaagatgaaaatgttggaaacaat
gcacaagctctcacatttgtgtatccatatggcgccactctgagtgtgatgaagcctgct
gttgccgtcctttcaactggctcagtctgcttccccctcaacaggcctgtcctggctttc
tttcaaggaaaggaggctggaaaactggtagttctgggttcctgccacatgttcagtgac
cagtacatggacaaagaggagaatagtaaaatcatggacgtcgtgctccagtggctcatg
actgaaaatattcagctgaaccagattgatgcggaagacccagaaatcacagattacacc
atgttgccagacacggggtgcctgtcggaacagctcagagtgtgcttacaagagggtgac
gaaaaccccaaagacttcacctccctctttgatatggctctgttcaatttgtcgaccgat
actttaccccaagtcatcagtgcttacaagcagcttaatgtcaaagatgagccgcttcag
ctgatcacaccgcagtttgagacccctctgcctcagctccaacctgctgttttcccacct
gccttaagcgatttgcctccacccatgctggacctgtttgatctagatgaaaccttctcc
tctgagaaagtgcgccttgctcagctcacaaataaatgtacagatgatgatcttgagttc
tacgtgcggaaatgtggggagattctgggcgtgactccaaagttggataaagatcagagg
gatgccaagcatatcttggagcacattttcttccaggttgtagagttcaagaaactcaat
caggagcacgatatcgacaccgaggcacaattcactccgggtcaatga
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